Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1315 |
Symbol | |
ID | 8419144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1540730 |
End bp | 1541386 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037891 |
Product | Sporulation domain protein |
Protein accession | YP_003198181 |
Protein GI | 258405439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00974436 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCACGA AAAAGAATAG CGCCAAAAGT GCGTCCAAGA GCAAAAAAAA GACTTCGGCC AGCGGACGGA AGATCAGTTT CGAGTTCACG CTGACCGGCC TGTTCGCGCT GGGGAGCCTT TTTCTGGTCA TTGTGGTCTG GGGGTTTGTT CTGGGCATTC TTGTCGGACG CGGGTACCAG CCGGAACGGT TTGTTCCGCA CCTGGAGAAC GTGCTGCCTT CAGGGGACCG GGCCGAGGCC GACAAAAGCG GTGAAAAGGT TCTGCGCTCT GAGGAACTGG GATTTTTCGA AGCCCTGCGC AGCGAGTCCG AAGAGCCCGC GTTACAGCAG CAAAAGTCCC AAGCTGCGGC CCCGCCCGAA ACGCGCCAGC AACGCGCATC GGCCCCACAG CAGAGCGACG GCGGTCAGCG CTACGCCCTT ATTTATCAGG TCGCGGCGTT CCAGGTTCAT GACAAGGCCC TGAAAATGCA AAAGATTTTA CGTAAAAAAC AGATGGAGTC GTTTCTGTCC GAAGCCAACC GAGACGGAAC GACCTGGTAC AGGGTGCTGG TCCCTTTTAC CGGGACACGC GCCCAGGCCC GGGAACTCAA GACCCGACTG GCCGAGGCCG GGGTAAACAA CCCCTTCGTG TACAAGAAAA AATCGCTGCA GGATTGA
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Protein sequence | MATKKNSAKS ASKSKKKTSA SGRKISFEFT LTGLFALGSL FLVIVVWGFV LGILVGRGYQ PERFVPHLEN VLPSGDRAEA DKSGEKVLRS EELGFFEALR SESEEPALQQ QKSQAAAPPE TRQQRASAPQ QSDGGQRYAL IYQVAAFQVH DKALKMQKIL RKKQMESFLS EANRDGTTWY RVLVPFTGTR AQARELKTRL AEAGVNNPFV YKKKSLQD
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