| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1205 |
|---|
| Symbol | |
|---|
| ID | 8419033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 1416761 |
|---|
| End bp | 1417339 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645037780 |
|---|
| Product | Rubrerythrin |
|---|
| Protein accession | YP_003198071 |
|---|
| Protein GI | 258405329 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1592] Rubrerythrin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.521926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCTT CAGTGAAAGG CACCAAAACC GAAAAGAATC TGTTGACCGC TTTTGCCGGC
GAATCTCAGG CCCGCAACCG CTACACCTAT TTCGCCGGTC AGGCCCGCAA GGACGGGTAT
GTACAGATCG CTGATATTTT TGAAGAAACC GCCAACCAGG AAAAAGAGCA CGCCAAGCGG
TTCTTTAAGT TCCTGGAAGG GGACACCGTC GAAATCACTT GGAGTTTTCC GGCCGGGGTC
ATTGGCACAA CGGCCGAAAA CCTCGAGGAG GCCGCTGGCG GGGAACATGA GGAATGGTCC
GAGATGTACC CCAGCTTTGC GGCCACGGCC CGTGAAGAGG GATTTCAGGA AATCGCGGCG
GTCTTCGAGG CCATATCCGT AGCCGAAAAA CAGCACGAGA AACGGTACCG GGACCTGCTG
GAAAACATCC GTTCCGGGAA AGTCTTCCAG CGCGACGATA AGGTCGTCTG GCGCTGCCGC
AACTGCGGTT ACCTCCACGA AGGCCAGGAC GCGGTCAAGC TGTGTCCTGC TTGCGCCCAT
CCCCAGGCCC ATTTCGAACT CCTTGGGGAA AATTGGTAG
|
|---|
| Protein sequence | MAPSVKGTKT EKNLLTAFAG ESQARNRYTY FAGQARKDGY VQIADIFEET ANQEKEHAKR
FFKFLEGDTV EITWSFPAGV IGTTAENLEE AAGGEHEEWS EMYPSFAATA REEGFQEIAA
VFEAISVAEK QHEKRYRDLL ENIRSGKVFQ RDDKVVWRCR NCGYLHEGQD AVKLCPACAH
PQAHFELLGE NW
|
|---|
| |