| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0843 |
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| Symbol | rho |
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| ID | 8418662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 999635 |
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| End bp | 1000882 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037412 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003197712 |
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| Protein GI | 258404970 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000858809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0802102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTAT CCGAGATGAA AAGGAAATCC ATGGCCGAAC TCATGCAGTT GGCCAAGGAG
TATAAAGTCG AAAACCCAAG CGGTCTTCGC AAGCAGGAAC TGATTTTTGC CATCCTCAGT
TCCTGTGCTT CGCAAAACGG CTCGATCTAT GGGGAAGGCG TGCTGGAGAT TTTGCCCGAC
GGGTTCGGCT TTCTTCGCTC CCCCATGTAC AGCTATATTC CGGGACCGGA CGATATTTAC
GTCTCCCCGT CGCAGATCCG CCGCTTCGGC CTGCGCAAGG GTGACGTGGT CTCCGGGCAG
ATCCGCCCGC CCAAGGAAGG GGAGCGGTAT TTCGCTTTGC TCCGGGTACA GCAAGTTGGG
TTTGCCACTC CAGAAGAATC CAAGAACCTA GTCCTGTTTG ATAATTTAAC GCCGATTTAT
CCGGACCAGC GCTTTGTCAT GGAAACTGGG GCGGAAAGCT ACTCCTCGCG GGTTGTGGAT
CTGCTGGCCC CCATAGGTAA GGGACAGCGC GGGCTCATAG TAGCCCCGCC ACGCACCGGA
AAAACGATGC TTTTGCAAAG TATCGCCAAC TCCATTACCG CCAACCACCC TGATTCCTAT
CTTATTGTGC TCCTGATCGA CGAACGACCT GAAGAAGTGA CGGATATGGA GCGTACCGTC
GACGGCGAAG TTGTCAGTTC GACGTTCGAC GAGCCTCCCC AACGTCATGT CCAGGTGGCG
GAAATGGTTT TGGAAAAAGC CAAACGCCTT GTGGAACGCA AAAAAGATGT CGTTATCCTC
CTGGACAGTA TCACCCGTTT CGGTCGAGCC CACAACGCGA TCATTCCTTC GTCAGGACGG
GTCCTCTCTG GCGGTCTGGA CTCCAACGCC CTGCAACGAC CGAAGCGTTT TTTTGGGGCT
GCGCGGAATA TCGAGGAAGG CGGGAGTCTG ACCATTATCG CTACGGCGCT TATCGATACC
GGATCGCGCA TGGATGAGGT CATCTTTGAG GAATTCAAGG GCACCGGAAA TATGGAAATT
TACCTGGATC GCCATCTGGC CGACAAGCGC GTCTTTCCGG CCATTGATAT CAACCGTTCC
GGCACCCGCA AGGAGGACCT GCTTTTGGAC GAGAACGTCT TGAACCGGGT TTGGATATTG
CGTAAGCTTC TGGCTCCCAT GAATTCAGTG GAGAGCATGG AGTTTCTCCT GGACAAAATG
CGCGGCACAA AGAGCAACCG CGAGTTTCTC GATATGATGA ACAGTTAG
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| Protein sequence | MNLSEMKRKS MAELMQLAKE YKVENPSGLR KQELIFAILS SCASQNGSIY GEGVLEILPD
GFGFLRSPMY SYIPGPDDIY VSPSQIRRFG LRKGDVVSGQ IRPPKEGERY FALLRVQQVG
FATPEESKNL VLFDNLTPIY PDQRFVMETG AESYSSRVVD LLAPIGKGQR GLIVAPPRTG
KTMLLQSIAN SITANHPDSY LIVLLIDERP EEVTDMERTV DGEVVSSTFD EPPQRHVQVA
EMVLEKAKRL VERKKDVVIL LDSITRFGRA HNAIIPSSGR VLSGGLDSNA LQRPKRFFGA
ARNIEEGGSL TIIATALIDT GSRMDEVIFE EFKGTGNMEI YLDRHLADKR VFPAIDINRS
GTRKEDLLLD ENVLNRVWIL RKLLAPMNSV ESMEFLLDKM RGTKSNREFL DMMNS
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