Gene Dred_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3190 
Symbol 
ID4957284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3470215 
End bp3471513 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content46% 
IMG OID640182378 
Productphenylacetate--CoA ligase 
Protein accessionYP_001114517 
Protein GI134301021 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0586807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTGGA ATGAACAGTT TGAAGCCATG GATCGGGAGG AGTTGCAAAA ACTGCAAACC 
TCCCGGTTGC AGCAAACGAT AACCAATGTA TACGAGAATG TAGCTTACTA CAGAGAGCTT
TTTGACCAAC ATGGGGTCAA GCCTACGGAT ATCCAAGGAT TGGAGGATAT CGGGAAATTA
CCCTTTACAA CAAAACTATC CCTCCGGGAT AATTATCCCT TTAATATGTT TGCTGTACCC
ATGAAAAAGG TGGTGCGATT GCATGCTTCA TCCGGAACCA CTGGTAAACC AACCGTTGTT
GGCTATACTC GGCAGGATAT TGAAAACTGG TCAGAGTTGG TGGCACGCAT GGTTACGGCT
GCCGGAGTTA CGGATAATGA TGTGGCCCAG GTAAGTTTTG GTTACGGACT GTTTACCGGG
GCCTTTGGAT TGCATTACGG TTTGGAGAAA GTTGGAGCCA CGGTGGTTCC TTCCTCCACC
GGGAATACAG AAAAACAAAT TATGCTGATG CAGGATTTTG GTACCACCGC TTTGATTGGT
ACACCCTCCT ATACGTTGCA TATCGCAGAA GTGGCGCGAC AAATGGGCAT CGATCCAAAG
TCATTGGGAT TAAAGGTGGG TCTATTTGGT TCCGAAGCAT GGACAGAGAG TATGCGGGAT
GAACTGGAGA AAGTTTGGGG TCTCTTTGCC ACAGATAACT ATGGCCTAAG TGAGGTCATA
GGGCCAGGTG TAGCGGGAGA ATGTCAAGAA CGCAAGGGTA TGCATATCGC GGAAGATCAC
TTCCTAATAG AAGTCATTGA TCCGGCAACC GGGAAAGCGG TACCAGATGG CGAAGAAGGG
GAGTTGGTTA TTACCAGCCT GACTAAGGAA GCACTGCCCA TTATCCGCTA TCGTACCCGG
GATATCACTA TAAAAACTTC AGAACCCTGT GCTTGTGGTA GAACTACAGC CCGCCTGCGT
AAAGTTACTG GGCGAACCGA TGATATGCTT ATTATTAGCG GTGTAAATGT TTTTCCATCA
CAAATCGAGG ATGTTCTATT AAAGATAGAA GGTGTAGCTC CCCATTACCA ATTAATTGTG
ACCAAGAAGG GCTATCTGGA TGCCTTGGAA GTCCAAGTCG AAATGAATGA CAAAGCCTTT
ACTGGTAATT GGCGTGATCT TGAGAATCTA GAAAGAAATG TAAAGGCACG ACTACAAACG
GTGCTTTCCA TTGGCCCAAA GGTGAAGCTT TTGGAACCTA GGTCCCTAGA GCGTACAGCT
GGCAAAGCGA AACGTGTAGT GGACTTAAGA AATAAATAG
 
Protein sequence
MIWNEQFEAM DREELQKLQT SRLQQTITNV YENVAYYREL FDQHGVKPTD IQGLEDIGKL 
PFTTKLSLRD NYPFNMFAVP MKKVVRLHAS SGTTGKPTVV GYTRQDIENW SELVARMVTA
AGVTDNDVAQ VSFGYGLFTG AFGLHYGLEK VGATVVPSST GNTEKQIMLM QDFGTTALIG
TPSYTLHIAE VARQMGIDPK SLGLKVGLFG SEAWTESMRD ELEKVWGLFA TDNYGLSEVI
GPGVAGECQE RKGMHIAEDH FLIEVIDPAT GKAVPDGEEG ELVITSLTKE ALPIIRYRTR
DITIKTSEPC ACGRTTARLR KVTGRTDDML IISGVNVFPS QIEDVLLKIE GVAPHYQLIV
TKKGYLDALE VQVEMNDKAF TGNWRDLENL ERNVKARLQT VLSIGPKVKL LEPRSLERTA
GKAKRVVDLR NK