| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1763 |
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| Symbol | |
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| ID | 4958523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1928059 |
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| End bp | 1930155 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640180936 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001113113 |
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| Protein GI | 134299617 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTC CTGTATTGAC CTTAAATCCT AGTCAAAAAG TTAGTGAGGT TGTAACCATC
TTTATGGGCA ATAAGATAGA TGGTGCACCA GTAGTAGATA AAAGCGGCAA ATTGGTAGGC
CTTTTCACAA AGAGTCATAT TTATCGCGTT ATAAATAATG GCTTGGATAT GAATAAAACA
AAGGTTAAGG ATTTAATGAC CAAGCAGCTA TTAACTGGTC ATCCAGATGA TGAGTTTAGT
GATGTAATAA ACGCTTCGGT ACCTCGACTT CCTGTTATTG ATGAAAAAGG ACGGGTTGTG
GGGATTGTAA CTCGCGGGGA TATAGCAAAA GCCTTTTTTA ATTTGCACCG AAGCATTTCT
CTCGAACTGG ATACGATTAT TAACTCAACT CATAATATGA TTATCTCGAT TGATGAAAAA
GGAATAATTA AGGTATGGAA CTTGTCTGCT GCAAGATTAT TAGATACCAA GGCAGAAGAT
GCAATTGGCA AACATTTATT AGATATTCTT CCTAACAGTG ATCTTTTAGA TGTTATTGAG
ACTGGAGAAG TTGATACTTT AAAGAAAGTG AAATTTAATA AACGTACCTT TATATCGAAC
CGTTCTCCAA TTAAAAAGGA TGGTAAAATT ATTGGTGCAG TGGCCGTTCT TCAGGATATA
TCAGAAATAG ACAAAATGTC TAAGGAACTA TGTTATGTTA AGGAATTGAA TAAAGAATTA
GATGCCATTG TTGAATCGTC TTTTGACGGT TTATTTATAA CCGATGGTAA AGGTATAATT
TTACGTTACA ATAAGGCATT TGAGCAATTA ACGGGCATCA AAGCACATGA ATATTTGGGA
CTAAGCGTAG CGGATATTAA AAAAGATGGA ATTATTTCTG AACCTGTAAC CTGCCATGTA
TTGGAGCAGA AGAAATCTAT TACAATTATG CAAAAAAGTA GAAGTGGGAA ACTCACACTA
ACTACGGGAA ACCCGATCAT GGAAGGAAAC GGAGAAATCA TAAGAGTTGT GTGCAATGTA
AGGGATATAA CTGAACTAAA TCTATTAAGA CACAAGCTAG AAAAAGCCAA AGGGTTAAGC
CAGCACTATG AGAACCAACT TCGTACTTTG AAGTTACAGT ACAATGGCTC TGAAAAAATA
ATAGCCACTT CTGCCAAAAT GAGGAACCTG CTTGATATGG TTGTAAGGCT GGCCTCCGTT
GACTCGACTG TTTTAATAAA CGGGGAATCT GGAACTGGGA AAGAACTAAT TGCAGAAATC
ATTCATAGTA ATAGTTCACG GAAAGATAAG CCATTTATCA AGGTTAATTG TGGGGCTATT
CCAGAAAATT TATTGGAGTC AGAGTTGTTT GGCTATGATG GCGGAGCATT TACGGGGGCT
AAAAAAGAGG GTAAGCCAGG ATATATAGAA ATGGCTTCTG GAGGCACATT ATTTCTTGAT
GAAATTGGTG AAGTCCCGCT TAATTTACAG GTAAAACTGC TTCGGTTTTT ACAGAGTAAG
GAAATTATTA GGGTAGGGGG GAAAAATTAT ATTAATGTTG ATGTTCGCAT AGTAACTGCT
ACAAACAGAG ATCTTTGGGA CATGGTTCAG AAAAAGCAGT TTCGAGAGGA TCTTTATTAC
CGATTAAATG TAGTACCTGT GCATATACCT CCACTGCGCG ATAGAAAAGA AGATATACCC
GCTCTTGTAG CACATTTTAT TCAGGTATTT AACCGCAAAT ACAAAAGGAA TAAAAGTATA
TCTCCAGAAG TAGTTGATTA TATTATGCAA TATAACTGGC CTGGGAATAT AAGGGAATTA
GAGAATCTTA TTGAGAGAAT GGTTGTTATT ACAATTAAAG ATATTATAAC TAGCGAAGAT
CTTCCTTTCC ATTTGCGGGA CACGGTTGGC TTAAGTTCTT CTTATATTTT GGTTTCAGGT
ATCGTTCCTC TAAGGGAAGC TATAGAAAGC GTAGAAAAGC AGTTATTAGA AAAGGTCTAT
TCTAAATATC GTAGTACTAG ACAAATGGCT AAGGAACTAA AGGTAAATGC CTCTACAGTT
GTAAGAAAGG CAGCAAAATA TCAAATATCG AAAGATTCAT CCATACAAAA TAATTAG
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| Protein sequence | MTSPVLTLNP SQKVSEVVTI FMGNKIDGAP VVDKSGKLVG LFTKSHIYRV INNGLDMNKT
KVKDLMTKQL LTGHPDDEFS DVINASVPRL PVIDEKGRVV GIVTRGDIAK AFFNLHRSIS
LELDTIINST HNMIISIDEK GIIKVWNLSA ARLLDTKAED AIGKHLLDIL PNSDLLDVIE
TGEVDTLKKV KFNKRTFISN RSPIKKDGKI IGAVAVLQDI SEIDKMSKEL CYVKELNKEL
DAIVESSFDG LFITDGKGII LRYNKAFEQL TGIKAHEYLG LSVADIKKDG IISEPVTCHV
LEQKKSITIM QKSRSGKLTL TTGNPIMEGN GEIIRVVCNV RDITELNLLR HKLEKAKGLS
QHYENQLRTL KLQYNGSEKI IATSAKMRNL LDMVVRLASV DSTVLINGES GTGKELIAEI
IHSNSSRKDK PFIKVNCGAI PENLLESELF GYDGGAFTGA KKEGKPGYIE MASGGTLFLD
EIGEVPLNLQ VKLLRFLQSK EIIRVGGKNY INVDVRIVTA TNRDLWDMVQ KKQFREDLYY
RLNVVPVHIP PLRDRKEDIP ALVAHFIQVF NRKYKRNKSI SPEVVDYIMQ YNWPGNIREL
ENLIERMVVI TIKDIITSED LPFHLRDTVG LSSSYILVSG IVPLREAIES VEKQLLEKVY
SKYRSTRQMA KELKVNASTV VRKAAKYQIS KDSSIQNN
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