Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0472 |
Symbol | |
ID | 5693293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 536892 |
End bp | 537962 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263055 |
Product | peptide chain release factor 1 |
Protein accession | YP_001528359 |
Protein GI | 158520489 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000257905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGACA GACTTCAAGA TGTGGAGCGG CGCTTTGGCG AGCTGGAGGG GCTCATGGCC GATCCCTCCA TCGTCAACGA CCGGGAAGCC TACCAGAAGC ACAGCCGGGA GCACGCCGAA CTTGCCGACA TCGTTGATGC TTACCGGCGG TACAAGGCGG TCAGCGACGA GATCGAAAAG AGCCGGGACC TCCTGGAAGA CCGGGACCCG GAGATCCGGG AACTTGCCAA AGAAGAGATT TCCCGCCTGA AAGACGAACG GGAGCGGCTT GACGGCGAGT TGCAGAACCT GCTTACCCCC AAGGACCCCA ACGACAACAA GAACGTGCTG GTGGAAATCC GGGCCGGAAC CGGCGGGGAA GAGGCATCTC TGTTTGCCCA CGATCTGTTC CGCATGTACT GGCGGTACGC CGAAACCATG GGCTGGAAGA CCGAGATCAT GAGCAGCAGC GTGACCGGCT CCGGCGGGTT CAAGGAAGTC ATCTTCATGG TCTACGGCAA GGGGGCTTAC AGCCATCTCA AGTTTGAAAG CGGTATTCAC CGGGTGCAGC GGGTACCCGA GACCGAGGCA CAGGGCCGGA TTCATACCTC GGCGGTTACC GTGGCGGTGC TGGCCGAAGC CGAAGAGGTG GAGCTGCACA TCGACCCGTC TGAGATCAAG ACCGACGTGT TTCGTTCCAG CGGACCGGGT GGACAGTCGG TCAATACCAC CGACTCGGCG GTGCGCCTCA CGCATCTGCC CACCGGCGTG GTGGTTATCT GCCAGGATGA AAAGTCCCAG TTGAAAAACA AAAACAAGGC CATGAAAGTG CTGCGGGCCC GTCTTCTGGA CCGGATGATT CAGGACCAGA ACGAAAAGAT CGCCCAGAAC CGCAAAGACC AGGTGGGCAG CGGCGACCGG TCCGGCCGCA TTCGTACCTA CAATTTTCCC CAGGGCCGGG TGACCGACCA CCGGGCCGGC ATTACCCTTT ATAAACTGGA GAGCGTTCTT CAGGGAGATC TCTCCGAACT GGTTAACGGC CTCGCCACCT ATTTTCAGGC CGAGCGGCTC AAGCAGGCCG ATGCCTCCTG A
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Protein sequence | MFDRLQDVER RFGELEGLMA DPSIVNDREA YQKHSREHAE LADIVDAYRR YKAVSDEIEK SRDLLEDRDP EIRELAKEEI SRLKDERERL DGELQNLLTP KDPNDNKNVL VEIRAGTGGE EASLFAHDLF RMYWRYAETM GWKTEIMSSS VTGSGGFKEV IFMVYGKGAY SHLKFESGIH RVQRVPETEA QGRIHTSAVT VAVLAEAEEV ELHIDPSEIK TDVFRSSGPG GQSVNTTDSA VRLTHLPTGV VVICQDEKSQ LKNKNKAMKV LRARLLDRMI QDQNEKIAQN RKDQVGSGDR SGRIRTYNFP QGRVTDHRAG ITLYKLESVL QGDLSELVNG LATYFQAERL KQADAS
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