Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0268 |
Symbol | |
ID | 5693086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 306709 |
End bp | 308604 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641262848 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001528155 |
Protein GI | 158520285 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000044 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCAAT TCATGCGACA AAAAGCCTCA TCCATTATCA TCAAAGGGGT TTTAAGCCTG GTCATTCTGG CCTTTATTTT TCTGGGCATC GGCAATTTCC GGGAGCAGCA GGAGGTGACG GCGGCCACGG TCAACGAGGA GATTGTTACC GGCCGGGAGT TCCAATACAC CTACCAGCGG CTTCTGGATA CCTACCGCCA GCAGTTCGGC GGTGCCTTAA ACGACGACCT GCTCAAGATG CTCAACCTCA AGGAGCAGGC CATGAACCAG CTGATCTCGG AAAAGATCAT TCTGCAGCAG GCGGACAAAC TGGGCCTGAA CGTGTCGGAC AGCGAGCTGG CCGCAACCAT CAGCAGCATT CCCGCCTTTC AGAACAACGG CCGGTTTGAC AAGACCCGGT ATAACCGGCT GCTGCAGAGC AACCGCATGA CCGCCGCCGC CTTTGAGCAG AGCCAGAAAC AGGGCCTTTT GGTCGACAAG TTGCGCACCC TGATCACCGA CAGCGTTCTG GTGTCTGACA ACGAGGCCCG GCAGTGGTTT GACTGGGAAA ACGCCCGGGT GAAGATCACG GCCGCCGTGT TTGCGGCAGA GGGCCGTACC GACGTTGATC CCGCCGAAGC GGCGGTGGCC GCCTATTATG AGGAACACAA GGATCAATAC AAAACACCGG AAAAACGGAA AATCACCTAT GTGCGCGTGG CGCCCGCCCG CTACCTGTCC GAGGTAAAGG TGACCGAAGA AGAGATCGCC GATTTTTACC AGGCCAACCA GGATTTCTAC TGGAACGAAG AGACCGTGGA GGCCCGGCAT ATCCTGATTT CCCTGGAACA GGACGCGGAC GAGGCCCGGG TGGAGGAAGC CCGGCAGAAA GCCGCTGATA TTTACGTTAT GGTGACGGAC GGGGGCAAGG ACTTTGCTGA AACCGCCAGG CAGTATTCAG AGGGTCCCAG CGCCGGCGAG GGCGGCTACC TGGGCGCCTT TACCCGGGAA GACATGGTGG CGCCTTTTTC GGAAAAGGCC TTTTCCATGG CGCCGGGAGA GATCAGCGAG CCGGTGAGAA GCCAGTTCGG CTGGCACATC ATCAAGGTGG AAAAGGTCAA CGCGGCATTC ACCACGCCCC TGGACGAGGT CCGGGCGGAC ATTGAAAAGC AGCTGCTGGA CCAGAAGGCC GGAGAGTACG CCTATGAGGA GGCCCTGACC CTGTTTGACA TGGCCCTGGA CACCGACAGC GTTGAACAGG CCGCCGCCTC CCGGAACCTG ACGGCCGTCA CTACCGACGC CATTACGCAG AACGATACCC TGGCCGATGT TGAAGCCGGC CGCACCATGG TACGCCAGGC CTTTGACTTT GTTGAAAAAG AGATCAGCGA TGTGATTACC GAAGGCAATA CGCATTTTCT TTTTCAGGTG ACGGAAGTGA TGCCGGCCGC GGTGCCCCCG CTGGAGAACG TTCAGGCCCG CGTGATAGAA GATCTGCGGG AACAGATGCG GAAAGAGGCG GCCCAGGCCG AGGCCGAAAG CGTGCTTGAA AAGGTAAAGG CGGGCCAGCC CCTGGAGGCG GCCTGTGCCG GCACGCAGGC CGAGATCGTG GCCACCGGCT TTTTCGGCCG AACCGGCGCT GTTCCCGATA TCGGCAACGA GCCGGCCCTG TCCAGAGCCG CTTTTGACCT GACCAAAAAT CAGCCGGTTG CCCCGAATGT GGTGGAGGGG AGAACCGGTT ATTACGTTGT GGTGTTAAAC GACCAAAAGG CACCCGAGGC CTCGGAATTC GAAGAGAAGC GGGACGCTGT TGTCAAGCGG CTGACCGCGC AGAAGAAAAA CGAGGTGTTC ATGTCCTGGC TGAAGACCAT GCGCCAGGAA AGCGACATCA CCATTGACGA GGCGTTCCTG AGGTAA
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Protein sequence | MLQFMRQKAS SIIIKGVLSL VILAFIFLGI GNFREQQEVT AATVNEEIVT GREFQYTYQR LLDTYRQQFG GALNDDLLKM LNLKEQAMNQ LISEKIILQQ ADKLGLNVSD SELAATISSI PAFQNNGRFD KTRYNRLLQS NRMTAAAFEQ SQKQGLLVDK LRTLITDSVL VSDNEARQWF DWENARVKIT AAVFAAEGRT DVDPAEAAVA AYYEEHKDQY KTPEKRKITY VRVAPARYLS EVKVTEEEIA DFYQANQDFY WNEETVEARH ILISLEQDAD EARVEEARQK AADIYVMVTD GGKDFAETAR QYSEGPSAGE GGYLGAFTRE DMVAPFSEKA FSMAPGEISE PVRSQFGWHI IKVEKVNAAF TTPLDEVRAD IEKQLLDQKA GEYAYEEALT LFDMALDTDS VEQAAASRNL TAVTTDAITQ NDTLADVEAG RTMVRQAFDF VEKEISDVIT EGNTHFLFQV TEVMPAAVPP LENVQARVIE DLREQMRKEA AQAEAESVLE KVKAGQPLEA ACAGTQAEIV ATGFFGRTGA VPDIGNEPAL SRAAFDLTKN QPVAPNVVEG RTGYYVVVLN DQKAPEASEF EEKRDAVVKR LTAQKKNEVF MSWLKTMRQE SDITIDEAFL R
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