Gene Dole_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0098 
Symbol 
ID5692913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp110589 
End bp112142 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content57% 
IMG OID641262675 
Productribonuclease 
Protein accessionYP_001527985 
Protein GI158520115 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTCTTC ACATGTCAAA AGAACTGATC ATCAATGCCA CGGAAAACGA GACCCGGGTA 
GCCCTTCTGG AAGACGGGAT CCTGGCCGAG TTTTTTATGG AGCGGGGAAA CCACCTGAAC
ATCTCCGGCA ATATCTACAA GGCCCGCGTC AACCGGGTGC TGCCGGGAAT GCAGGCCGCC
TTTGTGGACA TCGGCCTGGA CCAGGCGGCC TTTATCTATG TCACCGACGT GTTTTCCGAA
CCCTCACGGG AGGTGGAAAA CATTTTCAAT GAAACAGCCG AAGAACCGGA GCCCGTTGCC
GTAGCCAGGG AGGACGAGTT TGATTTGTCG GTGCCGGTGC CGCCGGCGGA CGTGAAGATT
GAAGACCTGC TTTCCGAAGG CCAGGAGATT CTGGTCCAGG TCTCCAAGTC TCCCATCGGC
AGCAAGGGGG CCCGCATCAC CACGCGCATT TCCCTGCCGG GCCGGTTTCT GGTGCTGATG
CCGACCGTCG ATCATGTGGG CGTGTCCAAG CGCATCGTGG AGGACGGCGA GCGGCAGCGG
CTCAAGGAGC TGGTGGTGTC CCTGCGAACC GAGCCCTTCG GGTTTATCGT GCGGACCGCG
GCCGAGGGGG TGGAAAAAGA GAAGCTGGAA AAGGAGATGA TACTGCTGGT CAACCTGTGG
CAGAAAGTGC AGAAACGGTT TGCCTCGGCT TCAGCACCGG CCCTGTTGCA CCGGGATATG
ACGGTCTCGC TTCGGGCCGT GCGGGACTAC CTGACCCACG AGGCGGACCG GGTGGTGGTG
GACGCGGACT ATGTCTACGA CGAGATCATG ACCTTTCTGG ATGAAATCAT GCCCCGAATG
AAGGCGTCGG TGGAGCGGTA CACAGGCAGC GAGCCGATTT TTGACGCCTA CAACATTGAA
GGGGACGTTT TCCGGTCCTT GAAGAAAAAG GTGTGGCTCA AGTCCGGGGG GTATATCATC
ATCGAGCCCA CCGAGGCCCT GGTGGTCATA GACGTAAACA CCGGCGGCTA CGTGGGGAAA
CACAACTTCG AAGAGACGGT ATTCAAGACC AACCTGGAGG CGGCCCGGGA GATTGCCTAC
CAGATCCGGC TGAGAAACCT GGGCGGCATT ATTATCATCG ATTTTATCGA CATGGCCAGG
GAGGCCAACC GGGAAAAGGT GTTTGTCTCG CTCAAGGAGT TTCTTGAAAA GGATAAAAGC
AAAACCACCC TGCTGCCTTT TTCCGAGCTG GGGCTGATCC AGATGACGCG GAAGCGGACC
CGCAACTCCG TGGCCCGCAT GCTCTGCGAG CCCTGTTTTT ACTGCAACGG CGACGGATAT
CTCCTCTCCC GGCAGACCAT CTGCTTTAAT ATTTACCGCG AGATCATGCG GGAATCCCAG
GACCTGTCCG GCGAAAAAAT TACGGTAAAG GTGCATCCGG ACATTGCCGA GATGCTTCAC
GGCGAAGAGA GCCGGGTGGT AACCGGCCTG GAGGCCGACC TGGGCCGGCA GATTATTATT
TATCCGGTGC CCAAGTTTCA TATCGAGCAG TTTGAAATCG AGGAGATACT GTAA
 
Protein sequence
MLLHMSKELI INATENETRV ALLEDGILAE FFMERGNHLN ISGNIYKARV NRVLPGMQAA 
FVDIGLDQAA FIYVTDVFSE PSREVENIFN ETAEEPEPVA VAREDEFDLS VPVPPADVKI
EDLLSEGQEI LVQVSKSPIG SKGARITTRI SLPGRFLVLM PTVDHVGVSK RIVEDGERQR
LKELVVSLRT EPFGFIVRTA AEGVEKEKLE KEMILLVNLW QKVQKRFASA SAPALLHRDM
TVSLRAVRDY LTHEADRVVV DADYVYDEIM TFLDEIMPRM KASVERYTGS EPIFDAYNIE
GDVFRSLKKK VWLKSGGYII IEPTEALVVI DVNTGGYVGK HNFEETVFKT NLEAAREIAY
QIRLRNLGGI IIIDFIDMAR EANREKVFVS LKEFLEKDKS KTTLLPFSEL GLIQMTRKRT
RNSVARMLCE PCFYCNGDGY LLSRQTICFN IYREIMRESQ DLSGEKITVK VHPDIAEMLH
GEESRVVTGL EADLGRQIII YPVPKFHIEQ FEIEEIL