Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0098 |
Symbol | |
ID | 5692913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 110589 |
End bp | 112142 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641262675 |
Product | ribonuclease |
Protein accession | YP_001527985 |
Protein GI | 158520115 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTCTTC ACATGTCAAA AGAACTGATC ATCAATGCCA CGGAAAACGA GACCCGGGTA GCCCTTCTGG AAGACGGGAT CCTGGCCGAG TTTTTTATGG AGCGGGGAAA CCACCTGAAC ATCTCCGGCA ATATCTACAA GGCCCGCGTC AACCGGGTGC TGCCGGGAAT GCAGGCCGCC TTTGTGGACA TCGGCCTGGA CCAGGCGGCC TTTATCTATG TCACCGACGT GTTTTCCGAA CCCTCACGGG AGGTGGAAAA CATTTTCAAT GAAACAGCCG AAGAACCGGA GCCCGTTGCC GTAGCCAGGG AGGACGAGTT TGATTTGTCG GTGCCGGTGC CGCCGGCGGA CGTGAAGATT GAAGACCTGC TTTCCGAAGG CCAGGAGATT CTGGTCCAGG TCTCCAAGTC TCCCATCGGC AGCAAGGGGG CCCGCATCAC CACGCGCATT TCCCTGCCGG GCCGGTTTCT GGTGCTGATG CCGACCGTCG ATCATGTGGG CGTGTCCAAG CGCATCGTGG AGGACGGCGA GCGGCAGCGG CTCAAGGAGC TGGTGGTGTC CCTGCGAACC GAGCCCTTCG GGTTTATCGT GCGGACCGCG GCCGAGGGGG TGGAAAAAGA GAAGCTGGAA AAGGAGATGA TACTGCTGGT CAACCTGTGG CAGAAAGTGC AGAAACGGTT TGCCTCGGCT TCAGCACCGG CCCTGTTGCA CCGGGATATG ACGGTCTCGC TTCGGGCCGT GCGGGACTAC CTGACCCACG AGGCGGACCG GGTGGTGGTG GACGCGGACT ATGTCTACGA CGAGATCATG ACCTTTCTGG ATGAAATCAT GCCCCGAATG AAGGCGTCGG TGGAGCGGTA CACAGGCAGC GAGCCGATTT TTGACGCCTA CAACATTGAA GGGGACGTTT TCCGGTCCTT GAAGAAAAAG GTGTGGCTCA AGTCCGGGGG GTATATCATC ATCGAGCCCA CCGAGGCCCT GGTGGTCATA GACGTAAACA CCGGCGGCTA CGTGGGGAAA CACAACTTCG AAGAGACGGT ATTCAAGACC AACCTGGAGG CGGCCCGGGA GATTGCCTAC CAGATCCGGC TGAGAAACCT GGGCGGCATT ATTATCATCG ATTTTATCGA CATGGCCAGG GAGGCCAACC GGGAAAAGGT GTTTGTCTCG CTCAAGGAGT TTCTTGAAAA GGATAAAAGC AAAACCACCC TGCTGCCTTT TTCCGAGCTG GGGCTGATCC AGATGACGCG GAAGCGGACC CGCAACTCCG TGGCCCGCAT GCTCTGCGAG CCCTGTTTTT ACTGCAACGG CGACGGATAT CTCCTCTCCC GGCAGACCAT CTGCTTTAAT ATTTACCGCG AGATCATGCG GGAATCCCAG GACCTGTCCG GCGAAAAAAT TACGGTAAAG GTGCATCCGG ACATTGCCGA GATGCTTCAC GGCGAAGAGA GCCGGGTGGT AACCGGCCTG GAGGCCGACC TGGGCCGGCA GATTATTATT TATCCGGTGC CCAAGTTTCA TATCGAGCAG TTTGAAATCG AGGAGATACT GTAA
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Protein sequence | MLLHMSKELI INATENETRV ALLEDGILAE FFMERGNHLN ISGNIYKARV NRVLPGMQAA FVDIGLDQAA FIYVTDVFSE PSREVENIFN ETAEEPEPVA VAREDEFDLS VPVPPADVKI EDLLSEGQEI LVQVSKSPIG SKGARITTRI SLPGRFLVLM PTVDHVGVSK RIVEDGERQR LKELVVSLRT EPFGFIVRTA AEGVEKEKLE KEMILLVNLW QKVQKRFASA SAPALLHRDM TVSLRAVRDY LTHEADRVVV DADYVYDEIM TFLDEIMPRM KASVERYTGS EPIFDAYNIE GDVFRSLKKK VWLKSGGYII IEPTEALVVI DVNTGGYVGK HNFEETVFKT NLEAAREIAY QIRLRNLGGI IIIDFIDMAR EANREKVFVS LKEFLEKDKS KTTLLPFSEL GLIQMTRKRT RNSVARMLCE PCFYCNGDGY LLSRQTICFN IYREIMRESQ DLSGEKITVK VHPDIAEMLH GEESRVVTGL EADLGRQIII YPVPKFHIEQ FEIEEIL
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