| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0040 |
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| Symbol | |
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| ID | 5692854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 46877 |
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| End bp | 49003 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641262616 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001527927 |
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| Protein GI | 158520057 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC AACCCGGCGT AAAACCCTGG ACAAAAATTC CCGACTATTT TGATGCCGCG
GAAATGACCA CCGGCATTCT TGCCTTTAAT GAAGAAACCT GCAGGCGGTG CGGCATCTGC
TCTTTTATCT GCCCGGCCCG GTCCATCAAA AGCGACCGGG GGCCCATGAA ATGGAAGGAA
GGCATGCCGT GGCTGGCCAC GGTGGCGCCC GATGTTACCA ACTGCATTGC CTGCGGCTGC
TGCCTGGCCG CCTGTCCGGA GGGGGCCATC ACCATCGAAC GGTGGTTTAA TCCCGGATAC
TTTTATCAGC GACTCTCCCA GACCAGCGAC CTGGTCTATC CCAAGTGCTA CCTTTCGACA
GACCCCGCGC CGGCGGACAC GTGGCCCGCG CCGGACCCGG ACATGCTTTC TCCCCGGTAC
GGTTCCCGGG AAAAGTGGGG CATGCGGGCC AACCGTCTCC GTATGACCGG CAACGTGATT
TTGGGCGGTT CCCGGTTTTT TTTAAACGAG GCCCTTCGCG GCCGGCTGTT TTCGACGGTA
AACGGCTTTT TATCCAAAAC CCCGTCTGAC ATCTCCTGGA CTGACCTGCT GGAGGAAAAC
GCCCGCCGGG TGCCGGACAA ACCCTTTCTG GTGTATCAAA ACGAGTCGTA CACCTACCGC
CAGGTCGATG AACAGGCCAA CCGGATGGCC CGGTTTCTTC TTGCTTTGGG CGGTGGCCAG
GGGTCCGGCG TGGGCATTCT GATGCGCAAT TCCCCCCGGT TTCTGGATAT TTTTTTCGGC
GCCCAGAAGA TCGGCATGTA CGTGGTGCCC ATCAACCCGG AGCTCAAGGG TGACGGCCTT
GCCTACATCA TCAACCACAG TGACATCGAC CTGCTGGTGG CCGACGCCGA ACTGGCAGAC
GCGGTCCGGT CGGTTGCGGA CCGTTTTGAA CAGCGCAAAA AAATCATTGT CAACGACATC
GAAGCCGAGG CCCGGGGAAT GGCCGTTCCC GAAACCATGG ACCGGCTGAG CCGGGCCTAT
GCCGATTTTT CGCCCCAACA CCCGGGCACC GGTTATCGGC CGGAAGACAT CTGCATGATC
ATGTACACCT CCGGCACCAC CGGTCCGCCC AAGGGGGTTG TGTATCGCTA CAACAAAACC
TCGGTCCGGC TGATGTGCCT GGCGGCTCAC CTGATGCTCA GGCCGAGCGA CACCTACTAT
ACGCCCTATG CCCTTTGCCA CGGCAACGCG CTGCTGGCCA CCACCACCAT GACCATGGGG
GTTCGGGCCA CCATGGCCCT GGCAAGAAAA TTTTCCGCCA GCCGCTTCTG GGAGGATGTG
CGCCGGCACC GGGCCACGGT ATTCAACACC ATCGGCTCGA TCATTCCCAT TCTCATGAAA
CAGCCGGAAA AGCCCGATGA TGCCGACAAT CATGTCCGGT TTGTCACCTC CTCCGGGTGT
CCGCCGGAGA TGTGGGGGCC GTTTGAAAAA CGGTTCGGGG TCAAGCTTTA CGAGGCCTAC
GGCGCCATTG ACGGCGGCGG CAAAGGCATC TTCAACTTCG GCACGGCACC GGCCGGCTCC
CTGGGCCGGA TTCCCCGGGT GGTAAACTAC CGGCTGGTGG ACGACAGGGG CCGGGACGTG
CCTGTCGGTG TGCCGGGTGA ACTGCTCTTT GAGGCAAAAA AGACATCCGG CCGGGTGGAG
TATTACAAAA ACCCGGCAGC CAGCCGGAAA AAATCCGGTG ACGGGTGGCT GCATACCGGG
GACCTGGTAA AACAGGACAT CAACGGGTTT CTTTATTTTG TGGGCCGCAA CACCGAATCC
ATGCGAAAGG GAGGGGAAAA CGTCTCCGCC TATGAAGTGG AGCAGGTGAT CATGGACCAT
CCGGCCGTTG AGGAAGCGGC GGTCTATGCC GTGCCCTCGG ACCTGGCCGA AGACGACATT
CTGGCCGCTG TCCGCCTGGT GGCAACCAAA ACCCTGACCC CTGAAGACCT GATCGCCTTT
CTTTCCGACA GGCTGGCCCG GTTTGCCGTT CCCCGGTATA TCCGGTTTAT GGATGAATTT
CCCAAGACCA GCTCCCACCG GATCATCAAG GGCGTGCTGG AAAAAGAGGG CATCACGGAC
GACACGTTTG ACGCGCAACA GGCATAG
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| Protein sequence | MTTQPGVKPW TKIPDYFDAA EMTTGILAFN EETCRRCGIC SFICPARSIK SDRGPMKWKE
GMPWLATVAP DVTNCIACGC CLAACPEGAI TIERWFNPGY FYQRLSQTSD LVYPKCYLST
DPAPADTWPA PDPDMLSPRY GSREKWGMRA NRLRMTGNVI LGGSRFFLNE ALRGRLFSTV
NGFLSKTPSD ISWTDLLEEN ARRVPDKPFL VYQNESYTYR QVDEQANRMA RFLLALGGGQ
GSGVGILMRN SPRFLDIFFG AQKIGMYVVP INPELKGDGL AYIINHSDID LLVADAELAD
AVRSVADRFE QRKKIIVNDI EAEARGMAVP ETMDRLSRAY ADFSPQHPGT GYRPEDICMI
MYTSGTTGPP KGVVYRYNKT SVRLMCLAAH LMLRPSDTYY TPYALCHGNA LLATTTMTMG
VRATMALARK FSASRFWEDV RRHRATVFNT IGSIIPILMK QPEKPDDADN HVRFVTSSGC
PPEMWGPFEK RFGVKLYEAY GAIDGGGKGI FNFGTAPAGS LGRIPRVVNY RLVDDRGRDV
PVGVPGELLF EAKKTSGRVE YYKNPAASRK KSGDGWLHTG DLVKQDINGF LYFVGRNTES
MRKGGENVSA YEVEQVIMDH PAVEEAAVYA VPSDLAEDDI LAAVRLVATK TLTPEDLIAF
LSDRLARFAV PRYIRFMDEF PKTSSHRIIK GVLEKEGITD DTFDAQQA
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