Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0015 |
Symbol | |
ID | 5692829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 17136 |
End bp | 17657 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641262591 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001527902 |
Protein GI | 158520032 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00130633 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCACA TCGACCTGCC TGAAAAAGAG GACCTGCCTT CGGAAATCGG AGACCTGCTG GCCCTCCTGC CGCCGCTCAA CGCCTTTCGC ATGATGGCGG TTGTGCCGGT AAGTTTCCGG CCCTTTCTCG ATCTGGCCGG ATCGGTGCTG TCCGGGGAGA CCTTTGACGC TAAATTGCGG GAGATTGCCG TGCTGCGGGT GGTGCGGCAG CTGAAGTGTG ACTATGCATG GACCCACCAT GTGACCGTGG GAAAGGCCAC CGGCCTGACC GATACCGAAA TCGGGGCCAT CAAAACCGAG GACCCGGTTT CTTCTCTTGA TGATGAAGGC AACCTGCTCT GCCGGGCCGC CGACGAAATC ACACTGTCGG CGTGCCTTTC CGACGACACC CTTGAACAGA TCAAGGCCCG CTACGGCAAC GCCGGTGCCG GTGCTCTGAT TCTCTGCTGC GCCTATTTCA ACATGCTGGG CCGGTGTCTT TTGTCCATGC GCGTGGACCT GGAAACAGAG AAAGTACTGT AA
|
Protein sequence | MPHIDLPEKE DLPSEIGDLL ALLPPLNAFR MMAVVPVSFR PFLDLAGSVL SGETFDAKLR EIAVLRVVRQ LKCDYAWTHH VTVGKATGLT DTEIGAIKTE DPVSSLDDEG NLLCRAADEI TLSACLSDDT LEQIKARYGN AGAGALILCC AYFNMLGRCL LSMRVDLETE KVL
|
| |