| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0014 |
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| Symbol | |
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| ID | 5692828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 15398 |
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| End bp | 16750 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641262590 |
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| Product | putative ribonuclease BN |
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| Protein accession | YP_001527901 |
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| Protein GI | 158520031 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.113788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAT CCAAAAAAAA GCGGCTGGCC GCCAGGACAT CCGGGGCGCT TGATTTCCTC
CGCACCGGCA TCTGGCGCGT CCGGTTACGG GAACTGGAGA CGCGAGAACG CGTGCTTGTT
CGATACGCCC GCATTTTCAT GATCGCGGGC CGGGAATTTA TCACCGACGG CGGCCCGTTG
CGGGCCTCAG CCCTGACCTT TTATACCGTT CTTTCCCTTG TGCCGGTCAT GGCCCTGGCC
TTTGCCGTGG CCAAGGGATT CGGCCTTCAG CAGACCCTGG AAAAAGAGGT GCTGGCCCAG
TTTCCCGGCC AGGAGGCGGT GATTCTCCAG ATGATCGAAT ACGCCCGGGC CCTGCTGGAC
CAGACAAAGG GCGGCCTGCT GGCGGGCGTG GGCGTGGCGG TCCTGATCTG GACCGTTATC
AAGGTGCTCA ACAACATCGA AAAGTCGTTT AACGCCATCT GGGCCAACAC CACGCCCCGC
TCCATGGGAA AAAAGTTCAG CGACTACCTC TCCATCATGC TGGTGGGGCC CTTGCTCCTG
ATCCTGTCGG GCAGCGCAAC GGTGCTGGTG GCCACCCAGG TGACCGCCAT CACAAACAAA
ATATTTTTCC TGGGTTGGTT TGCGCCGATC ATCATGACCG GGCTTCAGCT GTTGCCCTAC
CTGTTTGTCT GGTTGCTGTT TTCCTTTATT TACGGGTTTA TGCCCAACAC CCGGGTACCG
GTCCGTTCCT GTATTTTCGG CGGGGTTCTC GCGGGTACGG CCTTCAAGCT GCTGCAGTGG
GCCTATCTTA TCTTTCAGGT GGGGGTTTCC CGGTACAACG CCATCTACGG CAGCTTTGCG
GCCCTGCCCC TGTTCCTGAT CTGGATGCAG CTGAGCTGGC TGGTGACCCT GTTCGGCGCC
GAGCTTGCCT ATGCTCACCA GAGCGTGGGC CACTATGAAC TGGAGCCGGA CAGCCGAAAC
ATCAGTGACT TTCTCAAGCG AATTTACGGC CTGTACGTGG CCCACCTGCT GGTCAAAACC
TTCAAAAACG GGGAGCCCCC CCTGACCGCC GACCAGATAT CGGCCCGGCT GGACCTGCCC
ATCCGCATGG TCAACCGCCT GCTGGAAACG CTTTCCGCCG CCGGACTGGC GACACAGACG
CTGAGCGGCA CAGGCGGGGA CCCGGCCTGG CAGCCGGGCC GCGATATTAC CGACATCACC
ATTGCCTCGG CAACCGAGGC CATGGATAAA AACGGCACCA CCGAAATGCC CGTCGTTTCC
ACCCCGGAGC TTTCCCGCCT TTCAGACGCG GTCAGCGCCT TTTACGGGGA CATCGGCAAA
TCCAGGGCCA ACGTGGCGTT AAAGGATATA TAG
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| Protein sequence | MNESKKKRLA ARTSGALDFL RTGIWRVRLR ELETRERVLV RYARIFMIAG REFITDGGPL
RASALTFYTV LSLVPVMALA FAVAKGFGLQ QTLEKEVLAQ FPGQEAVILQ MIEYARALLD
QTKGGLLAGV GVAVLIWTVI KVLNNIEKSF NAIWANTTPR SMGKKFSDYL SIMLVGPLLL
ILSGSATVLV ATQVTAITNK IFFLGWFAPI IMTGLQLLPY LFVWLLFSFI YGFMPNTRVP
VRSCIFGGVL AGTAFKLLQW AYLIFQVGVS RYNAIYGSFA ALPLFLIWMQ LSWLVTLFGA
ELAYAHQSVG HYELEPDSRN ISDFLKRIYG LYVAHLLVKT FKNGEPPLTA DQISARLDLP
IRMVNRLLET LSAAGLATQT LSGTGGDPAW QPGRDITDIT IASATEAMDK NGTTEMPVVS
TPELSRLSDA VSAFYGDIGK SRANVALKDI
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