Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0006 |
Symbol | |
ID | 5692820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 5815 |
End bp | 7230 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641262582 |
Product | replicative DNA helicase |
Protein accession | YP_001527893 |
Protein GI | 158520023 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGG CAGCCCCCAA AAAAAAAGGT CGCCCCAAGG CCGGGGCCGC GGGTGCCGTA CCGTCAGACC CCCTGCTGCA CAGGCTGCCG CCCCAGAACA TCGAGGCCGA GGAGTCCATT TTAAGCACCA TTCTGATCGA CCCGGACCCG TCCACGCTGT TTGATGTGCT GGAGGTGCTG GCCCCCGAGG ATTTCTACAA ATCGGCCCAC CAGAAGATTT TTGCCGCCAT TGTCCGGCTG GTGGAGAAAA ACGAGCCGGT GGACCTGGTG ACGGTGAAAA ACACGCTGGC CGAGAGCGAC GAACTGGAGC CCATCGGCGG CGCCGCCTAC CTGGCCGGCC TGGTGGATTC GGCCCCCTAT GCCGCCAATG CCCGTCACTA CGCCGACATC ATAAAGAACA AGGCCTCGTT GCGCCGAATG ATCGAAAACG CCAACGAGAT TTCCCGGCGC TGCTTTGACA ATCCCTCCGA CGTGGAAGGG GTCATCGACT TTGCCGAGCG CGCGATCCTG GAAGTGGCCG AGCAGAAGGC GGGCCGCTCT TTTTACAAAC TCAGCCAGCT CCTGGTTGCC AACATAGAGA CCATCGAGGC AAACCAGGGC AAGGGGATCA CCGGCATTCC CAGCGGGTTT GACCGGCTGG ACAACCTGAC CGCCGGCTTT CAGAAGTCGG ACCTGATCAT TCTGGCGGCC CGCCCCAGCA TGGGAAAAAC CGCCTTTGCC CTTAATATCG CCCGCAACGT GGCTGTGGAC GCCAATGTGC CGGTGGCGGT GTTCTCCCTT GAAATGTCCA AGGAGCAGCT CTCCATGCGG CTGCTCACCG CCGAGGCCCG TATCGGGTTT CAGCGCCTGC GGAGCGGCTA TACCAGCCGG CAGGATATGG GTCAAATCAC GGACGCGGCC TCGGTGCTGG AGCAGGCCCC GCTGTTCATT GACGATTCGC CGGGGCTCAC CGCCATGGAG ATTCGGGCCA AGGCCCGGCG CCTGAAGCGG GAAAAGGGCA TCGGGATGAT CGTGGTGGAC TATCTTCAGC TCATGCGGGC ATCCCACCAG GGAGAACGCC GGGACCTGGA AGTGTCGGAG ATGTCCCGCT CCTTAAAGGG GCTTGCCAAG GAGTTGGACC TGCCCATCCT CGTCCTGTCC CAGCTCAACC GTTCTCCGGA ACAGAGCCAG GACAAGCGGC CCATGCTGTC CCACCTGCGG GAGTCCGGCT CCCTGGAGCA GGACGCCGAC GTGGTGCTGT TCATCTACCG GGATGAGATG TACAACAAGG AACCGGAAAA CCCCAACCGG GGATCCGCGG AGATCATCAT CGGCAAGCAG CGCAACGGCC CGGTGGGCAA GATCAAGCTT CAGTTTAGCG CCGACATCAC CCGGTTTCAT GACCTTGAAA CCGTGCATGC CGACATGGAA GCATAA
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Protein sequence | MEKAAPKKKG RPKAGAAGAV PSDPLLHRLP PQNIEAEESI LSTILIDPDP STLFDVLEVL APEDFYKSAH QKIFAAIVRL VEKNEPVDLV TVKNTLAESD ELEPIGGAAY LAGLVDSAPY AANARHYADI IKNKASLRRM IENANEISRR CFDNPSDVEG VIDFAERAIL EVAEQKAGRS FYKLSQLLVA NIETIEANQG KGITGIPSGF DRLDNLTAGF QKSDLIILAA RPSMGKTAFA LNIARNVAVD ANVPVAVFSL EMSKEQLSMR LLTAEARIGF QRLRSGYTSR QDMGQITDAA SVLEQAPLFI DDSPGLTAME IRAKARRLKR EKGIGMIVVD YLQLMRASHQ GERRDLEVSE MSRSLKGLAK ELDLPILVLS QLNRSPEQSQ DKRPMLSHLR ESGSLEQDAD VVLFIYRDEM YNKEPENPNR GSAEIIIGKQ RNGPVGKIKL QFSADITRFH DLETVHADME A
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