Gene Dole_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0002 
Symbol 
ID5692816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1624 
End bp3012 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content63% 
IMG OID641262578 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001527889 
Protein GI158520019 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCCCC TGACGAAAAA GACAATCGAA GAGATTCAGG GCATCGTGGG AAGCGACCAC 
TGCACCACGG CCCCTGAAGA CCGGGTCTGC TACGCCTACG ACGCATCCGC CGCCGACTGC
CTGCCCGATG CCGTGGTGTT TCCCGCGGAC CGGGACCAGG TGGCCCGGGT GCTGGCCCTG
GCGCACAGGG ATGGGTTTTG TGTCACTCCC CGGGGATCGG GATCAGGCAT GACCGGCGGG
TCGGTACCGG TGGCCGGGGG CGTGGTCATG GTGTTAAACC GGCTCAACCG GATTCTGGAG
ATCGACACGG ACAACCTGGT GGCTCGCGTT GAGCCGGGGG TGATCACCGG CGACTTTCAC
AAGGCCGTGG AGGCACTGGG CCTTTTTTAT CCGCCCGATC CCTCCAGCGC CGCCTTTTCC
ACCCTGGGCG GCAACGTGGC CGAGTGCGCG GGCGGCCCCC GGGCCGTCAA ATATGGAGTG
ACACGGGATT ATGTTCTGGG GTTGTCAGCA GTGCTGCCCA ACGGCGATAT TATTACCACC
GGCGTTCGCA CGGCCAAGGG GGTGGCCGGC TACGACCTGA CCCGGCTGAT TGCCGGTTCC
GAAGGCACCC TGGCCGTGAT TACTGAAATG ACCCTGCGGC TGTTGCCCCT GCCCGAGGCA
GTGGGCACCA TGACGGCCCT GTTTGACGAC ATCCGGCAGG CGGCGCGCAC CGTGTCTGAA
ATTATTCGGC AACGGATCGT GCCGCGCACC CTGGAGTTTA TAGACAACGC CTCCCTTGGC
TGCGTGGAAA AAAGCCTGAA TCTGGGGTTG CCGATAACGG CGGCGGCCAT GCTGCTGATC
GAGGTGGACG GCGCGCCTTT GGCCAATACC GCGGCCCTTG AAAAAATTGC CGCCATCTGC
ACCAGTCAGG GCGCCACCCA GGTGACGGTG GCCGACACGA AACAGGCCGC CGAAGACCTG
TGGCGGGCCC GCAAGGCCAT CTCCCCCGCC CTTTTCAACC TGGCCCCGGA CAAGATCAAT
GAAGATATCG TGGTGCCCCG CAGCCGGATT CCCGACATGG TGGCGGCCCT GGAGGCCCTG
AGCCGGCAAA CCGGCCTGAC CATCGCCTGC TTCGGCCATG CCGGCGACGG CAACATTCAC
GTGAATATCA TGGCCGACAA AAAAGATCCG GTGCAGGCGG AGAGGGCAAA AGAGGCGACA
GACCGGCTTT TTGAAGAGAC ATTGCGCCTG GGCGGCACGA TTTCCGGCGA GCACGGCATC
GGCATCACCA AGGCCCCCTA CCTGGGAAAA GAGGTGGGCG GAGCGGAGCT GATGCTGATG
CGGCGAATAA AAAAGGTGTT TGACCCCAAC GGAATTTTAA ATCCCGGAAA AATCTTTCAC
CTGATTTGA
 
Protein sequence
MAPLTKKTIE EIQGIVGSDH CTTAPEDRVC YAYDASAADC LPDAVVFPAD RDQVARVLAL 
AHRDGFCVTP RGSGSGMTGG SVPVAGGVVM VLNRLNRILE IDTDNLVARV EPGVITGDFH
KAVEALGLFY PPDPSSAAFS TLGGNVAECA GGPRAVKYGV TRDYVLGLSA VLPNGDIITT
GVRTAKGVAG YDLTRLIAGS EGTLAVITEM TLRLLPLPEA VGTMTALFDD IRQAARTVSE
IIRQRIVPRT LEFIDNASLG CVEKSLNLGL PITAAAMLLI EVDGAPLANT AALEKIAAIC
TSQGATQVTV ADTKQAAEDL WRARKAISPA LFNLAPDKIN EDIVVPRSRI PDMVAALEAL
SRQTGLTIAC FGHAGDGNIH VNIMADKKDP VQAERAKEAT DRLFEETLRL GGTISGEHGI
GITKAPYLGK EVGGAELMLM RRIKKVFDPN GILNPGKIFH LI