Gene Dhaf_4377 details

Gene Information

• Locus tag: Dhaf_4377
• Symbol: clpX
• ID: 7261402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 4645453
• End bp: 4646718
• Gene Length: 1266 bp
• Protein Length: 421 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 643564294
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_002460818
• Protein GI: 219670383
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGT ACAACGACGA AAAGAACCAG CTTAAGTGTT CGTTCTGTGG AAAGACTCAG 
GATCAAGTCA AAAAGTTGGT TGCCGGCCCT GGAGTTTATA TCTGTGATGA GTGTATTGAA 
CTCTGCAATG AAATCATTGA GGAAGAGCTC AATGAGGACT TGGGGATGGA GATAGGAGAT 
ATTCCAAAGC CCAAAGAAAT TCGGGCAATT CTCGACCAGT ACGTGATCGG ACAGGACGAA 
GCCAAAAAAG CGCTGGCTGT AGCCGTGTAC AACCACTACA AACGAATCAA TCTGGGTATG 
AAAATTGATG ATGTGGAGCT GCAAAAATCC AACATCGTTA TGCTGGGACC CACTGGATCC 
GGTAAGACTT TACTGGCCTC AACCTTAGCC AAAGTTTTGA ATGTGCCTTT TGCTATTGCG 
GATGCAACCT CCTTAACGGA GGCCGGTTAT GTGGGTGAAG ACGTTGAAAA TATCCTCCTC 
AAGCTCATTC AAGCCGCAGA TTATGACGTG GAAAAAGCTG AAAAAGGTAT TGTCTACATT 
GATGAGATTG ATAAGATAGC CCGCAAATCG GAGAATCCGT CCATTACTCG TGATGTCTCC 
GGAGAAGGCG TCCAACAAGC CCTTCTCAAA ATCCTCGAGG GAACCGTAGC CAGTGTTCCC 
CCTCAAGGTG GTCGCAAACA TCCTCATCAG GAGTTCATCC AACTGGATAC CACGAATATC 
TTGTTTATCG TGGGCGGGGC TTTTGACGGG ATCGATAAGA TCATCCAGAA CCGCATCGGG 
AAAAAGGTAA TGGGCTTTGG GGCTGAGATA AAGAAGAAGA GTGAGCAAAA CATCGGGGAA 
ACCCTTAGAG AACTTCTCCC TGCCGACCTC CTCAAGTTTG GTCTCATTCC GGAGTTCGTA 
GGACGTTTAC CGGTCATGGT CAAACTGGAT GCTCTGGATG AAGAAGCGTT GGTGCGGATT 
CTGACAGAAC CCAAGAATGC TCTGGTCAAA CAGTATGAAA AGCTTCTGGA GCTGGACGGA 
GTAGCTCTCG AATTTAAAGA GGAAGCCCTG AAGGCCATCG CCGAGGAAGC TATCCGGCGT 
AATACAGGAG CCCGTGGCTT AAGAGCTATC GTGGAAGAGA TCATGCAGAA TGTGATGTAT 
GATTTGCCTT CCCGCAACGA TGTGACCAAA TGCGTGGTGA CCAAGGACGT TATTCTGAAG 
AAGGAAGAAC CCCTTTTGGT GACCATCGAT AAAAGCAAGA AGAACAAAAA AGAAGAATCA 
GCATAA 

 

Protein sequence

MAKYNDEKNQ LKCSFCGKTQ DQVKKLVAGP GVYICDECIE LCNEIIEEEL NEDLGMEIGD 
IPKPKEIRAI LDQYVIGQDE AKKALAVAVY NHYKRINLGM KIDDVELQKS NIVMLGPTGS 
GKTLLASTLA KVLNVPFAIA DATSLTEAGY VGEDVENILL KLIQAADYDV EKAEKGIVYI 
DEIDKIARKS ENPSITRDVS GEGVQQALLK ILEGTVASVP PQGGRKHPHQ EFIQLDTTNI 
LFIVGGAFDG IDKIIQNRIG KKVMGFGAEI KKKSEQNIGE TLRELLPADL LKFGLIPEFV 
GRLPVMVKLD ALDEEALVRI LTEPKNALVK QYEKLLELDG VALEFKEEAL KAIAEEAIRR 
NTGARGLRAI VEEIMQNVMY DLPSRNDVTK CVVTKDVILK KEEPLLVTID KSKKNKKEES 
A