| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2105 |
|---|
| Symbol | |
|---|
| ID | 7259074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2269113 |
|---|
| End bp | 2270606 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643561997 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_002458577 |
|---|
| Protein GI | 219668142 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000081594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATAT TGGGAATTAT CGACATCGGT TCAAACTCAA TGCGTCTCGT CATTGTTCAG
CTTACTGACG ATAATTCTTA CCGGATTATT GACGATGTAA AGCATTCCGT CCGTCTGGGG
AAAGACATCC TGCCCAACGG CAATCTTCAC CCGATAAGGA TGCAGCGGGC CATCGAAACC
CTGCAATTTT ATAAAACTCT TTGCGATGCC ATACAGACCG ACCAAATCAT CGTCGTGGCG
ACGGAAGCCA TTCGCAAAGC TGCCAATCAA AAGGAATTCC TGGAACTGGT TTACAGCTTA
ACCGGCCTTG CCGTGCGCGT GCTGGAGGGT GAAGAAGAGG CTTACTATGA TTATTTTAGT
GTGGCCAATG TCTTTGCTAT GTCGGAAAAT CTTATCATGG ATATTGGGGG CGCCAGCACC
GAGCTGATCT GGATGAAAGA CCGCAAGGTC CGCAATATGG CCAGCCTGCC TTTTGGCACC
ATCAGCATAA GCGAGCAATT GAATCAGGCA GCCGGCAATA TCTATGAAAA AGAAAAAACT
GTAACCAACT CCTTGATCCA TACTTTCCAT CAACTGGGCT GGCTCCCCCA CGGCAAAACA
CTCATTGGTA TCGGTGGCAG CTTCCGCAAT ATTGCCAAGA TAGATAAAAA GCGATGCGCT
TATCCTTTAG AGCTTTCTCA CAATTATTAT CTTCCCGGTG AGCGCCTTCA GGATATCCAC
CAACTGATCA TGACCACTCC CGCCGGTCGC CGCAAGGATA TCCGCGGCCT GTCCTCAGAG
CGTGCCGATA TAATCTGGGG CGCCACCACA GCCATTAACG CCTTGCTTAT GTATTGCGGA
ATCAGCGATA TCTATATCAG TGGTTATGGA TTGCGCGAAG GCATTATCTA TGAAGAGATT
CTCCATGATC TCAATCCGGT GGAAGACGTT CTCGATTACT CCATTAATAA TTTGATGTCT
AATATTAGCT TGAACAAAAA GCATGCTTTT CATGTCTGGC AGCTCTCCCG CTCACTCTTT
GAGCAACTGG GCTCTGTTCA TGAGCTGAAT ACTTCCACTG TAAACGTTCT GAAAACGGCA
GCCTTATTGC ATGATAGCGG CATTAGTATC AGTTACTATG ATCACCACCT GCATTCCTTT
TATATTATTC TTAACTCCCA AATCAATGGC CTCAGCCAGC AGGAATTACT AATGGCCGCC
TATACAGCAG CCTCTCACCG CAAAAACAAG GTTAAGGTCG ATCCTGCCCA CAAAGGATTG
CTGCGGGAGC AGGAGATTAA TACTATCCGT AAACTAGGGG TTATTTTAAG AATTGCCGAG
TCTTTAGATC GCCGGATGAA TGATAATATC AACGCCGTGG ATTGTTTAAT CGAGCAGGAA
GTGGTAACCC TCAAGCTGAC CTCCAAATCT ACCCATGAAC TGGAAGCTAA AGAGACTATG
GAAATTTCAG CAGCTTTCTT AAAAGAGTTT GGCAGACGGC TCCATATTAT TTAA
|
|---|
| Protein sequence | MRILGIIDIG SNSMRLVIVQ LTDDNSYRII DDVKHSVRLG KDILPNGNLH PIRMQRAIET
LQFYKTLCDA IQTDQIIVVA TEAIRKAANQ KEFLELVYSL TGLAVRVLEG EEEAYYDYFS
VANVFAMSEN LIMDIGGAST ELIWMKDRKV RNMASLPFGT ISISEQLNQA AGNIYEKEKT
VTNSLIHTFH QLGWLPHGKT LIGIGGSFRN IAKIDKKRCA YPLELSHNYY LPGERLQDIH
QLIMTTPAGR RKDIRGLSSE RADIIWGATT AINALLMYCG ISDIYISGYG LREGIIYEEI
LHDLNPVEDV LDYSINNLMS NISLNKKHAF HVWQLSRSLF EQLGSVHELN TSTVNVLKTA
ALLHDSGISI SYYDHHLHSF YIILNSQING LSQQELLMAA YTAASHRKNK VKVDPAHKGL
LREQEINTIR KLGVILRIAE SLDRRMNDNI NAVDCLIEQE VVTLKLTSKS THELEAKETM
EISAAFLKEF GRRLHII
|
|---|
| |