Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4911 |
Symbol | |
ID | 8228517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5936605 |
End bp | 5938074 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644932760 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_003089277 |
Protein GI | 255038656 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.489735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.186236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAACC AGCTATACGA CACTTCAATG AGCCTTCTTA CTGATCTTTA CCAGCTTACC ATGGCTTATG GCTACTGGAA AGCGGGCAAG GCCGAGCAGG AAGCGGTATT CAATCTCTAT TTCAGAAAAC ATCCGTTTCA GGGCGGATTC ACCATTGCAG CGGGGCTGTG CAGCGTGATC GAATATTTGC AGGATTACCG GTTTAACGAG GAGGATCTGA CTTACATCGC CTCCCTTTCC GGCAGCGACG GCGATAGGCT CTTCGACGAC GGTTTTATCG ATTACCTGCG TAATATGGAG CTGCAATGCA GCATCGACGC CATTCCCGAA GGCACCGTGG TTTTTCCCAA TGAGCCGCTT CTGCGTATTC AGGGGCCGAT ATTGCAATGC CAGTTGCTGG AAACGCCGCT TTTGAACCTC ATCAACTTTC AGTCGCTGGT TGCTACCAAA GCCGCCCGGA TGCGCCTCGT GGCCGGGAAC GACGCCTTGC TCGAATTCGG TTTGCGGCGC GCGCAAGGGC CCGATGGCGG TGTAACGGCC AGCAGGGCGG CGTACATCGG GGGATTTAAC GCTACTTCCA ATGTGCTGGC CGGTAAACTG TACGACATTC CCGTGAAGGG CACACATGCG CACAGCTGGG TGATGTCTTT CGATTCCGAA CTGGAAGCGT TTGAAACTTA CGCGAAATAC ATGCCCAACA ACGTCACGCT GCTGGTGGAT ACCTACGATT CGCTGAACGG CGTACGCCAC GCGGTGGAGG TAGGGAAGCA GCTCCGCGAG GCCGGGCATG ACCTGGCCGG AATCCGCCTC GATTCGGGCG ATTTGGCCTA TCTGAGCATC GAAGCGAGGA AAATACTGGA CGAAGCAGGG TTCCCAAAAA CATCCATTGT GGCCAGCAAC GACCTCGATG AGTACATTAT GGACAGTTTA AAAATCCAGG GCGCGAGAAT AAATGTGTGG GGAATCGGCA CAAAACTCGT CACGGCCTAT GACCAGCCGG CATTGGGCGG GGTGTTCAAA CTGGCCGCGA TCCGCGACGA GTCGGGCGGG TGGGATTACA AACTGAAACT TTCGGAGCAG GCGATCAAGG TATCCACGCC CGGCATTCAG CAGGTGCGAA GGTTCAGGGA TTCAAATGGT TTCGTGTCCG ATATGATTTT TAATATCGAA ACGCCGCCCA TCGGGAAGGC TACCATGGTG GACCCTTACG ATTTTACAAA AAATAGGTCG TTCGGCGAGT CAGTGCTTTA TGAGGATTTG CTCGTCCCCG TTTTCGCAAA GGGCCGGCTT ATCTATAAAT TGCCGTCTGT ACACAACACG CGGAAGCGCG TGCAGGATCA ACTGGCACAT TTTTATAAGG GAATTAAACG ATTTGTAAAC CCGCATACCT ATCCGGTAGG ACTTGAAAAA GATTTATTTG ATTTAAAAAC CAACCTGATT TTTAAACTTC GCGCAGGAAA TGAAGCGTGA
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Protein sequence | MINQLYDTSM SLLTDLYQLT MAYGYWKAGK AEQEAVFNLY FRKHPFQGGF TIAAGLCSVI EYLQDYRFNE EDLTYIASLS GSDGDRLFDD GFIDYLRNME LQCSIDAIPE GTVVFPNEPL LRIQGPILQC QLLETPLLNL INFQSLVATK AARMRLVAGN DALLEFGLRR AQGPDGGVTA SRAAYIGGFN ATSNVLAGKL YDIPVKGTHA HSWVMSFDSE LEAFETYAKY MPNNVTLLVD TYDSLNGVRH AVEVGKQLRE AGHDLAGIRL DSGDLAYLSI EARKILDEAG FPKTSIVASN DLDEYIMDSL KIQGARINVW GIGTKLVTAY DQPALGGVFK LAAIRDESGG WDYKLKLSEQ AIKVSTPGIQ QVRRFRDSNG FVSDMIFNIE TPPIGKATMV DPYDFTKNRS FGESVLYEDL LVPVFAKGRL IYKLPSVHNT RKRVQDQLAH FYKGIKRFVN PHTYPVGLEK DLFDLKTNLI FKLRAGNEA
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