| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2769 |
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| Symbol | |
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| ID | 8226341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3424818 |
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| End bp | 3427358 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644930598 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_003087149 |
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| Protein GI | 255036528 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.594167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAT CCAGGTTGGC TAAAAGTTAT AAATCTATAC TTCCCTATTT CCTGAGTTTA
ATCATTTCGT TACCCGCTTT TTCACAGGTC ATTGCTCCAA CGGCCCCTTC GGGAGCTGGT
CCTACGTCGA CCGGCGCGCA AGGTGTTCCG CAATCGGGCC CGAGAGGCAC GGGCACTACC
GGCACGGGTA ACACGCAATC GGGCCCCGGC GGCCAGCAAG GCACCGGCCA GCAGGGTGCC
AATCAGCAGG GAGGCAACCA GCAGCAGGGG AATCAGCAGC AGGGAAATGA TGGCCAGGGA
GGCGATAAAG GCAAAAATGC CGCCAACCAG AACGGCCAGA ATAGCGAAGG TGGTGAGCAA
AGCAAGATTA ACACCAGCAC CAGCACCACC CTCACCCCGG AAGAGCAGGC CAAAGAAGCC
ATGCGCCAGA AGATCTACGG TTATTCCATT TTCGCAGATA AAAATCTGGC ACCAATCCCT
GATTTACAGA TCGTTACACC TACCACTTAT GTAGTAGGCC CCGGCGATGA GATGAAAATC
TACCTGTACA ACTACGCCGA AAGCACTTAT GAGGTGGTCG TCAACAAGGA CGGTTTCATC
AGCATTCCGC GTGTTGGTAA TGTGATGGTC GCTGGCCGCA CCATTGAAGA GATCAGAAAA
ATCCTGATTG ATAAATTTGC CAAATTCGTG CCGGGAATGC TCGGCGGCGG CGGCGAAACG
GCCCGTACCA AACTGATGGT AACCCTCGGC GAAGTGCGTT CGGTAAAAGT ATTTGTAACC
GGAGAAGTAA TCAACCCCGG AACGTACACA GTATCATCGC TTTCTTCCGC TTTTAATGCG
CTTTATCAGG CCGGCGGACC TAACGAAATT GGATCTTTCC GCGAAATCCG GGTAGTACGC
CAAGGCAAGG TAGTATCGAA AATGGACATT TACGACTACC TGGTAAACGG CAAGATCGAC
GGCGACATCC GCGTGCAGGA AAACGATAAC ATCGTGGTAG GCTACTACCT GAAACGCGCC
GAAATTGCAG GAATGGTGAA ACGCCCGGGT ATTTATGAAC TGACGCCCGA AGAAAAGCTG
GGAGACGTAC TTCGCTACTC CGGTGGATTT AACGACAAAG CTTACCGCGC ACGCTTGAAA
ATCCAACGCA TTACCTCGCG CGAACGCAAA ATCCTCGACG TACCTGAAAC ACAATATGAT
ACATTCGAGA TGGCGACCGG GGACTCCATT ACCGTAGAAA CCGTGCTCGA CCGCTACGAA
AACATCGTGA CGATCCAGGG AGCGGTAATG CGCCCGGGTG AATACTCGCT CGACAACAGC
CCGACTTTAA AGCAACTCAT CGAAAATGCA CAAGGCATGC GTGAAGACGC TTTTGTAGGC
CGTGTGAATG TGCTGCGCAC CCGTGAAGAC CTTACCATCC AGACCATCCC CATTAACTAC
ACCGACGTGC TGAACGGCGT AACGCCCGAC CTCGTACTCA CACGCCTTGA CGAAGTAATC
GTTCCGTCGC GTTTCGAAAT GGCTGAAACG GCGTTCGTGA GCGTGGAAGG TGAAGTTAAC
AACACCAAAA TCGGTGAAAA CGAAGGAAAA TTCCCCTACA CGACCGACAT GACGCTCGAA
GACGTACTCG TGCAGGCCGG TGGTTTGAAA GAATCGGCTT ACACTTCCGA AATCGAGGTG
GTACGCCGTA AAAGAAACTC GGTGGCCGGT GCAGCGAATG CGCAGATTTC GGAGGTCTAT
AAGTTCAATG TAAACCGCGA CCTATCCCTG AATGCGAAAG CGACCAATTT CGTCCTGTTC
CCATTCGACC AGGTAATCGT TCGCAAATCG CCTAATTATG TGGAGCAGCA AACGGTATTT
GTAGAAGGCG AAGTGCTGGT GAACGGCCCT TACACCATTA TCAACAAAAA CGACAAGATC
AGCGATATTA TCAAAAGAGC CGGCGGCCTT ACCGAGCTGG CATATCCGGA AGGAGCGACC
CTCCTGCGTC GCACGGTTGT GAAAAACCTC GACGAGCCGG TAGATTACGA GCAGGTGCAG
CAAACTGAAA AGCGGATCAA ATCAGGCACG CTTACAGGCG ACCTGCCGAA CGTGAAAGAA
GAGAAAATTG GTATTGTATT GAAAAATATC CTGAAAAACC CGGGATCGTT TGAAGACCTC
GTGGTGCAGG AAGGTGATAT CATCCGTATT CCGAAACGTC TGGAAACCGT TCAGGTGACT
GGCTCGGTGT TGTACCCAAC TACCGTGAAA TACGGCAAAG GCATGAACTT TACGGATTAC
ATTTCGCAAT CGGGTGGTTT TACGGTGCAA TCGCTCAGAA AGAGCTCATA TATCAAATAC
CCGAACGGCA ATATCGACCG CACAAGAAGA TTCCTGTTTT TCAATGTGTA CCCGAAAGTA
CAGCCGGGAT CGGAGATTTT CGTTCCAACA AGAGCCGCTC CTGCGCTTAA CCCGCAACAA
ACTATTGCTA CCGCTACCGG TTTGCTAGGT TCGGTAATGT CATTGATTTT AGCAGTATTG
GCTTTCCGTT CAATTAACTA A
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| Protein sequence | MNRSRLAKSY KSILPYFLSL IISLPAFSQV IAPTAPSGAG PTSTGAQGVP QSGPRGTGTT
GTGNTQSGPG GQQGTGQQGA NQQGGNQQQG NQQQGNDGQG GDKGKNAANQ NGQNSEGGEQ
SKINTSTSTT LTPEEQAKEA MRQKIYGYSI FADKNLAPIP DLQIVTPTTY VVGPGDEMKI
YLYNYAESTY EVVVNKDGFI SIPRVGNVMV AGRTIEEIRK ILIDKFAKFV PGMLGGGGET
ARTKLMVTLG EVRSVKVFVT GEVINPGTYT VSSLSSAFNA LYQAGGPNEI GSFREIRVVR
QGKVVSKMDI YDYLVNGKID GDIRVQENDN IVVGYYLKRA EIAGMVKRPG IYELTPEEKL
GDVLRYSGGF NDKAYRARLK IQRITSRERK ILDVPETQYD TFEMATGDSI TVETVLDRYE
NIVTIQGAVM RPGEYSLDNS PTLKQLIENA QGMREDAFVG RVNVLRTRED LTIQTIPINY
TDVLNGVTPD LVLTRLDEVI VPSRFEMAET AFVSVEGEVN NTKIGENEGK FPYTTDMTLE
DVLVQAGGLK ESAYTSEIEV VRRKRNSVAG AANAQISEVY KFNVNRDLSL NAKATNFVLF
PFDQVIVRKS PNYVEQQTVF VEGEVLVNGP YTIINKNDKI SDIIKRAGGL TELAYPEGAT
LLRRTVVKNL DEPVDYEQVQ QTEKRIKSGT LTGDLPNVKE EKIGIVLKNI LKNPGSFEDL
VVQEGDIIRI PKRLETVQVT GSVLYPTTVK YGKGMNFTDY ISQSGGFTVQ SLRKSSYIKY
PNGNIDRTRR FLFFNVYPKV QPGSEIFVPT RAAPALNPQQ TIATATGLLG SVMSLILAVL
AFRSIN
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