Gene Dfer_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1048 
Symbol 
ID8224618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1240769 
End bp1242070 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content52% 
IMG OID644928909 
ProductFolC bifunctional protein 
Protein accessionYP_003085462 
Protein GI255034841 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.252372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATATC AGGAAACGAT CGAATATCTG TACGACAGAT TGCCGGTTTT TCAGAATATC 
GGGGCCCGTG CTTTCAAGCC GGGCCTTCAT ACTACACGGG AGCTATGTAA GCTCCTGGGC
GATCCGCAGG ATCAGTTTCC CACAATCCAT ATTGCAGGCA CTAATGGCAA GGGAAGCACT
TCTCATATGC TCGCGGCAAT CCTCCAAGAA GCAGGTTACC GCGTCGGATT GTACACATCG
CCTCATTTAA AGGACTTTCG GGAGCGAATC CGCGTTAATG GCGTGCCGGT TTCGGAAGAT
TTCATTGTTG ATTTTATCGA CGATCAGAAA TCTAACATTG AAAGATTATC TCCATCATTC
TTCGAAGTCA CAGTTGCGAT GGCTTTTTCG TATTTCGGGC GATCGAAAGT CGATGTTGCC
GTAATCGAAG TGGGCATGGG CGGGCGGCTG GATTCCACCA ATGTGATTAC GCCTGAGCTG
TCAGTGATTA CCAACATCAG TTTCGATCAC ATGCAGTTTC TTGGAGATAC GCTGGGCAAA
ATTGCGGCGG AAAAGGCCGG TATTATCAAA AATGCCGTGC CCGTCGTCGT GAGCGAGGAC
CAGAATGCGG AAATATCCGA TGTCATCACA GCCGCGGCAG AAAATGCCCA GGCACCATTG
ACGTTCGCTG CGCGTGCGTA CGACGTAACA TACGTGGGCA TGCGCGACGG ACTAATGCTG
GTGAATATCC AAAACCGCGG GTCGGGTGAT TTGGAGGCGG AAAATCTCGC TCTTGACCTT
ACCGGTTCTT ATCAATTGAA AAACGTTGCC GGCGTTTGGG CCGCCAGAAA GGCCCTTTTG
TCGAAAGGTT GGAACATTTG CGATGAAGCC GTCATCCGTG CGTTACGCGC TGTGGGAAGC
ATCACGGGTT TGAAGGGACG GTGGCAGCAA TTGGGCCAGG CCCCCAATGT CTATTGCGAC
ACGGCGCACA ACACGGCCGG GCTCACAGCC ACCCTGGCAC AATTTGAAAG CGTTTGCAAA
GGTAAAAAGC GGTTTGTGAT CGGGTTTGTC GGTGATAAGG ACATTTCGAC CATGCTTTCG
CTGTTCCCGC GCGATGCGCA ATATTATTTT TGCGAACCTT CCAACATGCG TGCATTAAAA
GCGCCGGAAT TGCAGGCCAG GGCACTGGAA TGCGGCTTGG CAGGCGAAAC CTTCGGAAAT
GTGAAAGAAG CGCTTGCAGC GGCATTACGG GATTCCGCAC CGACGGACGC GATCTATGTG
GGAGGCAGTA CATTCGTCGT AGCAGATATT GAGAATTTAT AG
 
Protein sequence
MTYQETIEYL YDRLPVFQNI GARAFKPGLH TTRELCKLLG DPQDQFPTIH IAGTNGKGST 
SHMLAAILQE AGYRVGLYTS PHLKDFRERI RVNGVPVSED FIVDFIDDQK SNIERLSPSF
FEVTVAMAFS YFGRSKVDVA VIEVGMGGRL DSTNVITPEL SVITNISFDH MQFLGDTLGK
IAAEKAGIIK NAVPVVVSED QNAEISDVIT AAAENAQAPL TFAARAYDVT YVGMRDGLML
VNIQNRGSGD LEAENLALDL TGSYQLKNVA GVWAARKALL SKGWNICDEA VIRALRAVGS
ITGLKGRWQQ LGQAPNVYCD TAHNTAGLTA TLAQFESVCK GKKRFVIGFV GDKDISTMLS
LFPRDAQYYF CEPSNMRALK APELQARALE CGLAGETFGN VKEALAAALR DSAPTDAIYV
GGSTFVVADI ENL