Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0861 |
Symbol | |
ID | 5132168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 850798 |
End bp | 852960 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529779 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001214321 |
Protein GI | 147669503 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAACTG CCAACTCATT TGAACGAACT ATCGGCGGCA GGAAACTTGT TATTGAGAGT GGGAAACTTG CCCGTCTTGC AGATGCCGCG ATTACTATCC GCTATGCGGA TACTGAATTA CTGGTAACAC TTTGTTCTGC CAAGAAACCT CGCGAAGGGG TAGATTTTCT CCCCCTGACT ATAGATTACG AAGAGCGGAT GTATGCCGCC GGCAAAATCC CCGGCGGGTT TATCCGCCGT GAAGGCCGCC CCAGTGAACA GGCTATTTTG GCTGGGCGAC TGACTGACAG ACCTCTTCGC CCTCTTCTCC CCAAAGAGTG GCGCAATGAT CTTCAGATTA TTATTACCGT AATTGCTTCA GACAAGGAAA ACGACGCTGA TATCTGGGGC GTAGTGGGTG CTTCCACAGT TCTGGCCATG TCTGAAATAC CATATGAAGG TCCGGTCGGA GCCAGCCGTA TTGGATATAT AAACGGTGAA TTTGTGCTTA ATCCCACTTT TGCCCAGTTG GAATCAAGCC AGCTGGATCT GGTGGTAGTC AGCACCCGCA AAGCGGTGGT GATGATTGAA GCCGGTTCCA AAGAAATTCC TGAAGACATT ATGATTAACG CTATTGAGTT TGCCCATAAG GCAAATCAAG AGCTTATTGA CCTCCAGGAT GAAATCCGTG CCAAGCTCGG CAAAGAAAAG CTACCCGTGC CGGTGCTTGA AATACCCGAA GAAGTCAAAA CGGCTGTTGC CGCTTTTGTA AAAGGACGGG TAAATGAAGC CCTTAGCCAC CAAGATAAAA CCGCCCGTGA AAATGCGGTT GAAGGCCTTC AGGCTGAACT GGTTGCGGCT TTATCAGAAA CATTCGCCGA AGGTGATATC CTGGCCGCTT ATGACAAAGA AATCAAGAAA GCTATCCGCT CTACTATACT TGAGAAGGAT ATCCGGGTAA ACGGACGGGG TATCAAACAG CTTCGCCAGC TGGATGCTGA AACAGGGCTT TTGCCCCGCG TCCATGGCTC TGCTTTATTC ACCCGCGGTG ATACCCAGGT CATGGCTATA ACCACCCTTG GTTCTTTACA GGAATCCCAA CAGCTGGATG GCTTAAGTGC CGAAGATACC AAGCGTTTTA TGCTTCACTA CAACTTTGCC CCCTTCTCTA CCGGTGAAGT AAAACGTTCC GGTTCTCCCG GACGGCGTGA AATCGGTCAT GGCGCTTTGG CCGAACGTGC CTTAGTGCCT ATCCTGCCCA CTCCGGAAGA ATTCCCCTAT ACCATTCGTC TGGTAGCTGA CGTGGTTGGC TCATCAGGCT CTACCTCTAT GGGCAGTGTC TGTTCGTCCA GCCTGTCACT TATGGATGCA GGCGTACCGG TCAAAAAAGC TGTCGCAGGT ATCTCCATCG GCCTTATTAC CGGTGAAAAT GGTACCTACT GCACCATTAC TGATATTGAA GGCATCGAAG ATAACTATGG CGATATGGAC TTTAAAGTTG CCGGTACCCG TGACGGCATA ACCGCCATAC AGGTGGATAT GAAGGTCAAG GGTATCAGTT TTGATATTAT CCGTGATGCC ATATACCAGG CAAAAGAAGC CCGCTATAAC ATACTGGATG TAATGGACAA AGCTCTTGCC CAGCCTAAAA CAGAGCTTAG CCCTTATGCC CCCAGAATGT ACAAGATAAA TATTGACCCC TCCAAGATTG GCAGTGTTAT CGGCAGCGGC GGCAAAACTA TCCGCTCTAT TATTGAGCAA ACCAATACTA CCGTTGACAT TGAAAATGAC GGCACAGTGG TTATTGGTGC TATTGACGAG GCTTCGGCTA AAAAGGCCAT CAAGATAATT GAAGACCTGA CTAAAGACAT CGAAGCCGGC AGTATTTATA CCGGTAAGGT CACCCGTATA ATGACCTTCG GTGCTTTTGT TGAAATCCTG CCCGGAAAAG AAGGCATGGT ACACATAAGC GAACTGGCCG ACCATAGAGT TGAAAAAGTG GAAGATATAG TCAAGGTGGG TGATGATATA ACGGTTAAGG TTATAGAGAT TGATAACCAG GGCAGGGTAA ACCTGTCACA CAGGGTTATT CTCAACCCGA ACGCTGTACC CATTTCACGC AATCGTGATT CTCAGCCGCG TCGTCCCGGT CCTTTCCGCC CTTCTGACCG GTCTAACTCA TAA
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Protein sequence | MITANSFERT IGGRKLVIES GKLARLADAA ITIRYADTEL LVTLCSAKKP REGVDFLPLT IDYEERMYAA GKIPGGFIRR EGRPSEQAIL AGRLTDRPLR PLLPKEWRND LQIIITVIAS DKENDADIWG VVGASTVLAM SEIPYEGPVG ASRIGYINGE FVLNPTFAQL ESSQLDLVVV STRKAVVMIE AGSKEIPEDI MINAIEFAHK ANQELIDLQD EIRAKLGKEK LPVPVLEIPE EVKTAVAAFV KGRVNEALSH QDKTARENAV EGLQAELVAA LSETFAEGDI LAAYDKEIKK AIRSTILEKD IRVNGRGIKQ LRQLDAETGL LPRVHGSALF TRGDTQVMAI TTLGSLQESQ QLDGLSAEDT KRFMLHYNFA PFSTGEVKRS GSPGRREIGH GALAERALVP ILPTPEEFPY TIRLVADVVG SSGSTSMGSV CSSSLSLMDA GVPVKKAVAG ISIGLITGEN GTYCTITDIE GIEDNYGDMD FKVAGTRDGI TAIQVDMKVK GISFDIIRDA IYQAKEARYN ILDVMDKALA QPKTELSPYA PRMYKINIDP SKIGSVIGSG GKTIRSIIEQ TNTTVDIEND GTVVIGAIDE ASAKKAIKII EDLTKDIEAG SIYTGKVTRI MTFGAFVEIL PGKEGMVHIS ELADHRVEKV EDIVKVGDDI TVKVIEIDNQ GRVNLSHRVI LNPNAVPISR NRDSQPRRPG PFRPSDRSNS
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