Gene Ddes_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1920 
Symbol 
ID7285635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2314176 
End bp2315147 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID643582741 
ProductADP-L-glycero-D-manno-heptose-6-epimerase 
Protein accessionYP_002480494 
Protein GI220905182 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACGTGA TTACCGGTGG AGCGGGTTTT TTGGGCAGCG CTCTTTTATG GCAGCTTAAC 
TGCATGAACA TTGACGATAT CGTGATTGTG GACAACCTGG CACGGAGCGA TAAATGGCGT 
AATCTCGTCA AGCGCCGCTA CGTGGACTAT CTGCACAGGG ACCAGTTTTA CGATCTCATG 
CAGCGCGATG CCCTGCCCTG GAAGGTCAGC GGCGTGGTGC ATCTCGGAGC CTGTTCGTCC 
ACCACGGAAA AGGACGCGGA TTTTCTGATG GAAAACAATT TCCATTACAG TCGCGACCTG 
TGCCGTTACA CGCTGGACAA GGGGGGCCGC TTCATCAATG CCAGCTCCGC CGCGACCTAT 
GGCGACGGTT CGCTGGGATT CAGCGATGAC GAGCAGCTTG TGCCGCGCCT GCGGCCTTTG 
AACATGTACG GCTACTCCAA ACAGCTTTTT GACCTATGGC TGCTACGCGA GGGCTTGCAG 
GCCGAAACGG CCAGCCTGAA ATTTTTCAAT GTTTACGGTC CCAACGAATA TCACAAGGGC 
GATATGCAGA GTGTGGCTGC CAAGGCCCAC CGGCAGATAG GCCAGGAAGG TTTGCTGCGG 
CTCTTCAGGT CCGACCGCCC GGATGTGGCG GACGGGGAAC AGAAGCGCGA TTTTGTTTAC 
GTCAAGGACT GCACTGCCCT GATGGCCTGG CTGCTGGAAC GCAACGATGT TTGCGGTATC 
CACAACGTGG GTACAGGAAC CGCGCGCAGC TTTAACGATC TGGCGCAGGC CGTGTTTGCG 
GCCCTGAACC GGCCCTGCCA TATAGAGTAT GTGGATATGC CCGACAGCCT GCGGGGGCGC 
TACCAGCACT ACACACAGGC AGACATGGCC TGGCTCGGGC AGGTAGATTG CCCGCTTGCA 
TTTACACCGC TTGAAGAAGG CGTGGCAGAC TATGTGAAGG GCTATCTGGA AAAAGAAGAC 
CCCTATCTGT AG
 
Protein sequence
MYVITGGAGF LGSALLWQLN CMNIDDIVIV DNLARSDKWR NLVKRRYVDY LHRDQFYDLM 
QRDALPWKVS GVVHLGACSS TTEKDADFLM ENNFHYSRDL CRYTLDKGGR FINASSAATY 
GDGSLGFSDD EQLVPRLRPL NMYGYSKQLF DLWLLREGLQ AETASLKFFN VYGPNEYHKG 
DMQSVAAKAH RQIGQEGLLR LFRSDRPDVA DGEQKRDFVY VKDCTALMAW LLERNDVCGI 
HNVGTGTARS FNDLAQAVFA ALNRPCHIEY VDMPDSLRGR YQHYTQADMA WLGQVDCPLA 
FTPLEEGVAD YVKGYLEKED PYL