Gene Ddes_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0091 
Symbol 
ID7283743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp118521 
End bp119300 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID643580877 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_002478689 
Protein GI220903377 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.813637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGTA AACGGGTCAT CCCCTGTCTT GATGTACGCA ACGGCCGCCT GACCAAGGGG 
GTCAAGTTTG TGGGCAACGA GGATATCGGC GATCCCGTGG AAAGCGCCCG CCGCTACTAC
GAAGAAGGCG CGGACGAGAT CGTTTTTTAC GACATCACGG CGTCAGCCGA GGCGCGCGGT
ATTTTCCTGG ATGTTGTGGA GCGCGTGGCT GAACAGATAT TCATCCCCTT TTCCGTAGGT
GGCGGCATTT CCAGCGTGGC CGATATGCGG GCCGTACTGC TGGCCGGGGC GGAGAAAGTC
TCCATCAATT CTGCGGCGGT GAAAAATCCC CGGCTTATCG GCGACGGGGC GGATGCCTTC
GGTTCCCAGG CTGTCGTGGT AGGCATGGAT GTGCTGGCCG TGCCGGAAAG TCCAGAAATT
CCTTCCGGCT ACGAGATTGT CATCCACGGC GGGCGCAAGC GCATGGGGCT GGACGCCATC
GCCTGGGCGC GCTGCTGTCA GGAACTGGGC GCGGGCGAAC TGTGCGTGAA CTCCATTGAT
GCCGACGGCA CCAAGGACGG CTACGAACTG AAGCTTACCC GTGCTATTGC CGATGCCGTT
TCTTTGCCGG TCATTGCTTC CGGTGGGGCG GGCGAACCCC GGCACATGCT GGAGGCCGTG
ACCGGCGGCG GGGCCTCGGC GGCACTTATC GCCTCCATTG TACATTACGG GCAGTACAGC
ATACGCCAGT GCAAGGAGTA TATGGCCGCC CACGGGGCGC GGATGCGCCT GACCTGGTAA
 
Protein sequence
MLSKRVIPCL DVRNGRLTKG VKFVGNEDIG DPVESARRYY EEGADEIVFY DITASAEARG 
IFLDVVERVA EQIFIPFSVG GGISSVADMR AVLLAGAEKV SINSAAVKNP RLIGDGADAF
GSQAVVVGMD VLAVPESPEI PSGYEIVIHG GRKRMGLDAI AWARCCQELG AGELCVNSID
ADGTKDGYEL KLTRAIADAV SLPVIASGGA GEPRHMLEAV TGGGASAALI ASIVHYGQYS
IRQCKEYMAA HGARMRLTW