| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0056 |
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| Symbol | |
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| ID | 7283707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 73067 |
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| End bp | 74131 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643580841 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002478654 |
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| Protein GI | 220903342 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAAA AAGATAACGT GGCACAAGCC CGCCCTTTTC AATGCCCGGA AAGTCCGGCG
CCGAACAGTC CCCTTGCGGG AGGTTCGGGG CCGAGCGCTT ACGGGCAGCA TGAACAAAAC
GCCGACAGCG CGACGCACGG GCAAACCCGT CGTACGCCTC CCCTGCCGCA GCAACATGGC
GTACTTGTGC TCAACAAGCC TTCCGGCCCC ACCTCGGCCC GTTGCCTCAC CGCCATAAAG
CGGCTGGGAC AAAAAAAGAT CGGCCACGCC GGCACACTGG ACCCTCTGGC TTCAGGTGTG
CTGCTGGTGC TGCTCGGGCA GGCCACCAAA CTTTCCGGCC ATCTCATGAG CGGGGGCGGC
AAGGTTTATA ACGGCGTGCT GCGCCTCGGG CAAACCACCG ACACCTGGGA CATCGAAGGC
CAGGTTACGG CTGAAGCCCC CTGGCAGCAC ATCAGTGAAG ACGATGTGCG GCGAGAGGTC
ACGGCATGGC TGCAACTGAC AGAGCAGCCT GTTCCGTCCT ATTCCGCCGC AAAACACGAA
GGGCAGCCCC TGTACAAGCT GGCCCGCAAA GGGCTTGATG CCCCGCAAAA GACAAAGTTT
ATGGAAATTT CACAGGCGGA CGTGCTTGAA ATAAGCCTGC CGCTTGTGCG CTTTCGGGTC
GCATGCAGTT CCGGCACCTA TATACGCTCC CTGGCCCACA GCTTGGGGAT GCGACTTGGA
TGCGGAGCCG TGCTCACGGA ACTGACCCGG GAGTACAGTC ACCCCTTCGG CCTTGATGTG
GCCCGCGATC CCGCGGACTT CACGGCTGAC CCCACCCTGT TGCCCGGCTG CGTTATCCCC
GTTGCGGATG CGCTGCCTCA CTGGCCCAGG GTGGACCTCA CGCCGGAAGA AGCCGCCCGC
GTACGTAATG GCATGGCTGT GTCTTGCCGT ACGCCACAGG CTGACGCCGC CCCCGGCGAC
GAACTCGCAT TTCTGATGGA TCAGGGGCAA GCCCTGGCCT TGGCAAAACG CGAGATCACG
CCCGCCGGGC CGTGCTGGGC CGTAATGAGG GGACTTTGGA ACTAG
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| Protein sequence | MVKKDNVAQA RPFQCPESPA PNSPLAGGSG PSAYGQHEQN ADSATHGQTR RTPPLPQQHG
VLVLNKPSGP TSARCLTAIK RLGQKKIGHA GTLDPLASGV LLVLLGQATK LSGHLMSGGG
KVYNGVLRLG QTTDTWDIEG QVTAEAPWQH ISEDDVRREV TAWLQLTEQP VPSYSAAKHE
GQPLYKLARK GLDAPQKTKF MEISQADVLE ISLPLVRFRV ACSSGTYIRS LAHSLGMRLG
CGAVLTELTR EYSHPFGLDV ARDPADFTAD PTLLPGCVIP VADALPHWPR VDLTPEEAAR
VRNGMAVSCR TPQADAAPGD ELAFLMDQGQ ALALAKREIT PAGPCWAVMR GLWN
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