| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0038 |
|---|
| Symbol | |
|---|
| ID | 7283689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 47279 |
|---|
| End bp | 49024 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643580823 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002478636 |
|---|
| Protein GI | 220903324 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.36998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCG GAGTAAAACT TTCTCTGATG TCTGCATTTC TACTGCTGCT CACTGCAATT
CTTGGTACGT TCAGTCTCAT GCAGATGTCA AAAATCAATG ACGGTTCAAC AGAGCTGAGC
TACGAATGGC TGCCATCAAC ACGTTGTGCC ATGGATTTCA ATATCATCGC CTCTGATTAC
CGGCTGGCCG AAGCCCTGTT CATCACAACA CCCCCCACGG ATGAATACCG GCAGGTATAC
AAAACCCGCA TGGAAAGCAC CCAGAAAAGC CTTTCTGCGG TTGCCGCACG GTACATGCCC
CTTATCGGCT CAGCGCAGGA GCGCCAGGCA TATGAAACCT TTGCGCGGCA ATGGAAGGAA
TATTCGGACC TCAGCGGCCG CATCATGCAA CTGGCCGACA GCGGCAATCT GGATCAGGCC
CTGCAGCTTT TCCGTGTACA GTCCCGCACG CTTTATGAGC AGGGGCGTGA ATCCCTCGCG
ACACTGGTGC GCATCAATAC CGAAGGCGGC AATGCGGCCA GCAAGGAATG CGATGACCTG
TACGCCACGT CAAAAAAACT GATTATTATC CTGCTTGCGG CCGCACTTAT CGCCGGCACG
CTTACCGTGG TCTTCATCAT ACGGAGCACA CACAAACAGC TGGGCAAAGA CCCGGGCGAA
CTTAACAGCA TTGCCGACCG CGTTGTGCAG GGCGACTATA ATGTGGACGA TGGAAACGCC
AAAGAAGGCG TATACAAGGC CATTGTAGCC ATGGTCAGCG CCCTGAAGTC AAACATCGAA
CGGGCGCAGG AAGAATCGAT CAGGGCGCAG GATGCCGCTG AAAAGGCCGG GATAGCACAG
CATGCCGCTG AAGAAGCCCA GGCCAGGGCA GAAAACGCCC GCCGCGAAGG TCTGCTTGAC
GCCGCAGCCC AGCTTGAGGG CGTGGTCAAC ATCATTGCCT CCGCCTCTGA GGAGCTTTCG
GCCCAGATCG AGCAGTCTTC TCACGGCGCG GCACAGCAGG CAGGCCGCAT TGCAGACACG
GCCACCGCAG TGGAAGAAAT GAATGTCACC GTGCTTGAGG TCGCCAGAAA CGCCTCGTCC
GGAGCGGACC TTTCCGGCGC TACACAACAG AAAGCCCGTG AAGGCGAACA GATAACCTCC
CAGTGCCAGA CCGCCATCAG CGATGTGCAA AACGACACTA TGGCGCTTAA AGCCGGCATG
GACGAGCTTT CTGGACATGC GCAAGCCATC AACGAAATCA TGACTGTCAT CTCCGACATC
GCGGACCAGA CAAACCTGCT GGCCCTCAAT GCGGCCATTG AAGCGGCCAG AGCAGGAGAT
GCCGGGCGCG GCTTTGCCGT GGTGGCCGAT GAAGTGCGCA AACTGGCCGA AAAAACCATG
GCCTCCACCC AGGATGTGGG CAGGGCCATC CGCGCCATCC AGGAAAGCTC CCGGGATGGG
GTGCATCGTA TGGATGCCGC GGTGGACAAG GTAAACCTGG CTACGGAATT CTCCCTGCGC
AGCGGAGACG CACTGAAGGA AATCCTCGGT CTGGCCGAAC AGACGGCTGA CCAGGTACGC
AGCATCGCCA CGGCCAGCGA GCAGCAGTCT GCCTCATCTG AAGAAATCGC CCGCTCTGTG
GAACACGTCA ACACCATTGC CGGTGAAACC GCCCAGGCCA TGGGCGAAGC CAGCAAGGCC
GTTTCCGACC TGGCAGCCCA GGCCCAGGAG CTGGCGAGGA TAATCGAATC TCTCAAGCGG
GCCTGA
|
|---|
| Protein sequence | MKLGVKLSLM SAFLLLLTAI LGTFSLMQMS KINDGSTELS YEWLPSTRCA MDFNIIASDY
RLAEALFITT PPTDEYRQVY KTRMESTQKS LSAVAARYMP LIGSAQERQA YETFARQWKE
YSDLSGRIMQ LADSGNLDQA LQLFRVQSRT LYEQGRESLA TLVRINTEGG NAASKECDDL
YATSKKLIII LLAAALIAGT LTVVFIIRST HKQLGKDPGE LNSIADRVVQ GDYNVDDGNA
KEGVYKAIVA MVSALKSNIE RAQEESIRAQ DAAEKAGIAQ HAAEEAQARA ENARREGLLD
AAAQLEGVVN IIASASEELS AQIEQSSHGA AQQAGRIADT ATAVEEMNVT VLEVARNASS
GADLSGATQQ KAREGEQITS QCQTAISDVQ NDTMALKAGM DELSGHAQAI NEIMTVISDI
ADQTNLLALN AAIEAARAGD AGRGFAVVAD EVRKLAEKTM ASTQDVGRAI RAIQESSRDG
VHRMDAAVDK VNLATEFSLR SGDALKEILG LAEQTADQVR SIATASEQQS ASSEEIARSV
EHVNTIAGET AQAMGEASKA VSDLAAQAQE LARIIESLKR A
|
|---|
| |