Gene Ddes_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0012 
Symbol 
ID7283663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp16823 
End bp17836 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content63% 
IMG OID643580797 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002478610 
Protein GI220903298 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.522134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAG AGAAAGACTG CCGTATAGTG TTTATGGGTA CTCCCGGTTT TGCGGCCGCC 
AGTCTGAGGA GACTGGCGGC CTGGCCGCGT GCCCATATTG TCGCTGTATA TACGCAGCCT 
GACCGTCCGG CGGGGCGCGG CCAAAAGCTC GCCATGTCCG CCGTGAAAAA ACTTGCGCTG 
GAACTGGGCA TTCCCGTCTG TCAGCCCGCC AGCCTTAAAG GCGCCGAAGC CCAGGCAGAG 
CTGGCGGCTT TCAGGCCCGA TGTGCTGGCT GTGGCCGCGT ACGGGCTTAT TCTGCCTGAT 
GCCGTGCTGG ACATGCCTCG CCTTGCGCCG GTCAACGTGC ATGCCTCCAT CCTGCCGGGC 
CTGCGCGGCG CGGCTCCCAT ACAGCGCGCA GTTATGGAAG GCTGGCAGCC TGGAGCCAGG 
GCGGGTATAT CCATAATGCG TATAGGCAGC CGGCTTGATG CAGGGCCTGT ATATGCCATG 
GGCGATACTC CTATCGGCGA GCACACTTCG GGCAGCCTGC ATGACGCTCT GGCGGAGCTG 
GGCGCGGAGC TGCTTGTTAC CGTTCTGGAC GACCTGATGG AGGGCAGGGC GGTGGCTGTG 
GAACAGGATG AAAGCCTTGC CACCCATGCG GCCAAGCTGG GCAAGCGCGA CGGCTATATA 
AACTGGACGC GCAGCGCGGC CGAGGCCCAT GCGCAGATAC GCGGGGTTAC CCCCAGGCCC 
GGCGCGCGCA CGGTACTGCA TCTGGATGCA GGAACAGACT TTGAAGCCCG GAGCATGCCG 
CTTATTGTTT CACCTGGAAC AATCGGAGAA ACCGCCGCAG GTACCGCGCC GGGAAGTGTA 
CGGCATGATG GGCAGGACAT CAGCATTGCC TGCGGCGACT GCTGGTATAC CCTGGGCATG 
GTGCGGCCTG AAGGCCGCAA GGACATGCCG GTGCGTGACC TGCTCAACGG CAGTTTGAAA 
AATCTGCCGC AGGGTGTGTG CGGGGAGGCC CGATCGCCGG AAGAGTCGTT GTAG
 
Protein sequence
MAQEKDCRIV FMGTPGFAAA SLRRLAAWPR AHIVAVYTQP DRPAGRGQKL AMSAVKKLAL 
ELGIPVCQPA SLKGAEAQAE LAAFRPDVLA VAAYGLILPD AVLDMPRLAP VNVHASILPG 
LRGAAPIQRA VMEGWQPGAR AGISIMRIGS RLDAGPVYAM GDTPIGEHTS GSLHDALAEL 
GAELLVTVLD DLMEGRAVAV EQDESLATHA AKLGKRDGYI NWTRSAAEAH AQIRGVTPRP 
GARTVLHLDA GTDFEARSMP LIVSPGTIGE TAAGTAPGSV RHDGQDISIA CGDCWYTLGM 
VRPEGRKDMP VRDLLNGSLK NLPQGVCGEA RSPEESL