Gene Dde_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2254 
SymbolrplB 
ID3757265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2280142 
End bp2280972 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content59% 
IMG OID637783145 
Product50S ribosomal protein L2 
Protein accessionYP_388746 
Protein GI78357297 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000201463 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTC GCAAGCTTAA ACCTACTTCT CCTGGGCGCC GCTTTCAGAC CGTTTCCTCT 
TTCGAGGAGA TTACCCGTAG CACGCCCGAG CGCAGCCTTA CTGAAGGCCT GACCAAAAAG
AGCGGTAGAA ACTGCTACGG CCGCGTGACT TCTCGTCGTC GCGGTGGCGG GCACAAGCGT
CTTTACCGTA TCATCGACTT CCGTCGCGAC AAGGTCGGCG TGCCGGCTAA AGTGGCTCAT
GTCGAATACG ATCCCAACCG TTCCGCACGT ATTGCACTGC TGCACTACTC GGATGGTGAA
AAGCGCTACA TTCTGGCTCC TCTCGGTGTG AAGCAGGGTG ACGTGGTTGT GGCCGGCGAT
TCCGTGGATA TCAAGCCCGG TAACGCAATG GCTCTGTCCC GTGTTCCTGT GGGTACCATC
GTGCACAACA TCGAACTGTA CCCCGGCAAG GGCGGACAGT TCTGCCGTGC CGCCGGAACC
TATGCCCAGC TGGTCGCCAA GGAAGGCAAC TACGCACTGC TGCGTATGCC CTCCGGCGAA
GTGCGCAAGG TGCTGGTCAC CTGCTGCGCC ACCATCGGCC AGGTTGGCAA TCTTGATCAC
GAGAAGATCT CGTACGGTAA GGCAGGTCGC AGCCGCTGGC TGGGTCGCCG TCCCAAGGTT
CGCGGTGTTG CCATGAACCC GATCGATCAC CCGCTTGGCG GTGGTGAGGG CAGAAGCTCC
GGCGGACGTC ATCCTGTGAC TCCGTGGGGT ATTCCCACCA AGGGCTTCAA GACCCGCGAC
AAGAAGAAGG CCTCTTCCAA GCTTATCATC AAGCGTCGTG GCCAGAAGTA G
 
Protein sequence
MAVRKLKPTS PGRRFQTVSS FEEITRSTPE RSLTEGLTKK SGRNCYGRVT SRRRGGGHKR 
LYRIIDFRRD KVGVPAKVAH VEYDPNRSAR IALLHYSDGE KRYILAPLGV KQGDVVVAGD
SVDIKPGNAM ALSRVPVGTI VHNIELYPGK GGQFCRAAGT YAQLVAKEGN YALLRMPSGE
VRKVLVTCCA TIGQVGNLDH EKISYGKAGR SRWLGRRPKV RGVAMNPIDH PLGGGEGRSS
GGRHPVTPWG IPTKGFKTRD KKKASSKLII KRRGQK