Gene Dd703_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3973 
Symbol 
ID8087363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4609121 
End bp4610137 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content51% 
IMG OID644838069 
Producttranscriptional repressor RbsR 
Protein accessionYP_002989548 
Protein GI242241367 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000131921 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTACGA TGAAGGATGT AGCGCGTCTG GCTAGGGTGT CTACGTCAAC GGTTTCTCAC 
GTTATCAATG ACAACCGCTA TGTCAGCGAT GCGATTCGCG ACCGAGTGAT GAAGGCGGTT
GATCAGCTCA ATTACGCGCC ATCGGCGCTG GCGCGTAGTC TTAAAATCAA TCAAACCAGA
ACCATCGGTA TGCTACTGAC AGCCAGTAGC AACCCATTTT ACGCGGAGGT GGTTCGCGGC
GTTGAGCGCT GTTGCTATGA GCGTGGATAT AGCCTGATTC TGTGTAATAC GGAAGGCGAT
CACCATCGTA TGAGCCGCAG CCTAGAAACG CTGTTGCAAA AAAGAGTGGA TGGTTTATTG
CTGATGTGTA CCGAGAGTCG GATGCCTTCT CCCGATATTA TTCGCCGATA TCCTTCAATT
CCGGTGGTGA TGATGGATTG GGCACCTTTC GACGGTAACA GTGATGTGAT CAAAGATAAC
TCTCTGCAAG GGGGTGAAGC GGCAACGCAT TATCTGATTT CCCAGGGATA CCGCAAAATT
GCCTGTATCG CCGGGCCGCA AGATAAAACA ACCGCGCATA ACCGGCTGGA AGGTTATCGC
AAAGCTATGC ATCAAGCGGG GTTAGTTATT CCCGAAGGGT ATGAAGTTAC CGGTGACTTT
GAATTTGAAA CCGGTTTTCG TGCGATGGAG AGTCTGCTGG CATTGCCCGA ACGGCCCCAT
GCTGTTTTTG CCTGTAATGA TGCTATGGCG GTCGGCGCTT ATCATGCGCT ATATCAGGCT
GGGTTATCCG TTCCGCATGA TATGGCGGTT ATCGGTTATG ACGATATCGA ATTGGCTCGT
TATCTATCGC CGCCGCTTAC GACTGTCCAC CAACCGAAGG ATGAACTGGG TGAGCTGGCG
ATTGATACGC TACTTCACCG TCTGGAGCAT CCAGGAGCAG AGCCTGCATT ATTAGTCCTG
ACACCTGAGT TGGTCATCCG GGATTCTGTT GGTCAGGGCC CTTCGATCGG TGTCTGA
 
Protein sequence
MATMKDVARL ARVSTSTVSH VINDNRYVSD AIRDRVMKAV DQLNYAPSAL ARSLKINQTR 
TIGMLLTASS NPFYAEVVRG VERCCYERGY SLILCNTEGD HHRMSRSLET LLQKRVDGLL
LMCTESRMPS PDIIRRYPSI PVVMMDWAPF DGNSDVIKDN SLQGGEAATH YLISQGYRKI
ACIAGPQDKT TAHNRLEGYR KAMHQAGLVI PEGYEVTGDF EFETGFRAME SLLALPERPH
AVFACNDAMA VGAYHALYQA GLSVPHDMAV IGYDDIELAR YLSPPLTTVH QPKDELGELA
IDTLLHRLEH PGAEPALLVL TPELVIRDSV GQGPSIGV