Gene Dd703_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3962 
SymbolglnG 
ID8087348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4591889 
End bp4593301 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content57% 
IMG OID644838054 
Productnitrogen regulation protein NR(I) 
Protein accessionYP_002989537 
Protein GI242241356 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR01818] nitrogen regulation protein NR(I) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.389706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAG GGATAGTCTG GATTGTCGAC GACGATAGCT CCATCCGTTG GGTGCTTGAA 
CGCGCACTTA CAGGGGCGGG TTTAACCTGC GCAACTTTTG ATAACGGAAC CCAAGCGCTG
AATGCACTGG CGACACAAAC GCCAGACGTT CTGTTATCCG ATATCCGTAT GCCTGGTATG
GATGGGTTGG CATTGCTGCA ACAGATCAAA CAACGCCATC CGATGCTGCC GGTCATCATT
ATGACAGCGC ATTCCGATTT GGACGCAGCC GTCAGCGCTT ATCAACAGGG CGCGTTTGAT
TACCTGCCAA AACCGTTTGA TATTGATGAA GCCGTCGCGT TGGTCGAGCG CGCCATCAGC
CACTATATGG AACAGCAACA ACCGGTTCGC AGCCAGCCCA TCAGCGGGCC GACGACGGAC
ATTATCGGTG AAGCGCCCGC CATGCAGGAC GTGTTCCGGA TAATCGGCCG GTTGTCCCGC
TCATCCATCA GCGTCCTGAT CAATGGTGAA TCAGGTACCG GGAAAGAACT GGTGGCCCAT
GCGCTGCATC GCCACAGCCC GCGCGCCAAG GCACCGTTTA TTGCGCTTAA TATGGCGGCT
ATTCCCAAGG ATCTGATTGA ATCAGAACTG TTCGGCCATG AAAAAGGTGC ATTTACCGGC
GCTAACCAGA TTCGTCAGGG CCGTTTCGAA CAGGCTGACG GCGGCACTCT GTTTCTGGAT
GAAATCGGGG ATATGCCGCT GGACGTACAG ACCCGCCTGT TGCGTGTGCT GGCTGACGGC
CAGTTCTATC GCGTCGGCGG CTATGCGGCA GTGAAAGTGG ACGTGCGCAT CATCGCCGCC
ACCCACCAGA ACCTGGAACT GCGGGTGCAG GAAGGTAAGT TTCGCGAAGA CCTGTTCCAC
CGTCTGAATG TGATTCGAGT TCATCTGCCG CCGCTACGCG AGCGCCGGGA AGACATTCCT
CGCCTGGCCA GGTATTTCCT GCAAGCCACG GCTAAAGAGC TGGGCGTTGA ACCCAAGAAC
CTGCATCCGG AAACTGAAGC GGCGTTGACC CGTTTACCGT GGCCGGGCAA CGTGCGCCAA
TTGGAAAACA CCTGTCGCTG GCTCACGGTG ATGGCGGCCG GTCAGGAAGT TCTGATTCAG
GATTTACCGC CGGAGCTGTT CGAAACCACA GCGCCGGACG CTACGGTTCA CGTCATGCCG
GACAGTTGGG CTACCCTGCT GGCTCAGTGG GCCGATCGCG CGCTGCGTTC CGGTCATCAG
AACCTGCTGG CCGAAGCACA ACCAGAGATG GAGCGTACTT TATTGACCAC AGCCTTGCGG
CACACACAGG GACATAAACA AGAAGCCGCA CGTTTACTGG GCTGGGGCCG CAATACGCTC
ACGCGCAAGC TCAAGGAACT GGGTATGGAA TAA
 
Protein sequence
MQRGIVWIVD DDSSIRWVLE RALTGAGLTC ATFDNGTQAL NALATQTPDV LLSDIRMPGM 
DGLALLQQIK QRHPMLPVII MTAHSDLDAA VSAYQQGAFD YLPKPFDIDE AVALVERAIS
HYMEQQQPVR SQPISGPTTD IIGEAPAMQD VFRIIGRLSR SSISVLINGE SGTGKELVAH
ALHRHSPRAK APFIALNMAA IPKDLIESEL FGHEKGAFTG ANQIRQGRFE QADGGTLFLD
EIGDMPLDVQ TRLLRVLADG QFYRVGGYAA VKVDVRIIAA THQNLELRVQ EGKFREDLFH
RLNVIRVHLP PLRERREDIP RLARYFLQAT AKELGVEPKN LHPETEAALT RLPWPGNVRQ
LENTCRWLTV MAAGQEVLIQ DLPPELFETT APDATVHVMP DSWATLLAQW ADRALRSGHQ
NLLAEAQPEM ERTLLTTALR HTQGHKQEAA RLLGWGRNTL TRKLKELGME