Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0065 |
Symbol | |
ID | 8087486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 76787 |
End bp | 77908 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644834131 |
Product | ROK family protein |
Protein accession | YP_002985706 |
Protein GI | 242237525 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.600972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAACT CTCAGCCACT TGGTAAAACT CTTGCAAACG CGCTTTCTCA ACTGGAGCGT CTGTCGTTGG AACCGATATC CGGCTGGGCT TCCGTCCTCG ATATTCCGTT GGCGAGCGCA CAGCAATTGA TGGAATTTCT GGAAAAACAG GACATTATCC AACGTAAACC ACAGGGTATC GAATTGCATC CGCAGTCGCC CGTCGTCATA GGTTTTGATT TGGGCGGCAC CAAAGTCAAA GGCCGGTTGG CGACGCTGGC CGGCGAAGTG CTGGCGCAAA CGGCGCACCC TACCCGCAAA GGCGATGAAC AAGCCGCGAT GCAACAAATG TCGTCGCTGG CGGAGGATCT GCTCAGCCAG GCCGGCGTTT CGTCGCAGCG GCTGAAGCAG ATCGCCATCG GCATTCCCGG CTCAATCGAT AAACAAGGCA ATGTACAACT CTCCCCCAAC CTGCGCTTAC CTGCCCGGCT GCCTGCTGTG CTGTCACTGG CGGATGGCAA GCCATGTCCG ACGGTATTCG AGAATGACGT CAATCTGGCG GCGCTGGGGG AATACCACTA TGGGCACGGC AAGGGCAGCG ATTCGCTGGT GTTTGTCGCC TTCGGCACCG GCGTCGGGAT GGGCATTATC GCGCAGGGCG GCATTATCAG CGGGCATAGC GGTATGGCGG GTGAAATCGC GCTCTTGCCG CTGAGCGCAA CGCCTTACGA AGACGCCAGA ATTTCCGTGG GCGGCGTGTT TGAAGATCGT GTCAGCAGCA GCGCGATTCG CCAGCGTTAC CAGGGGGGAA ATATCGAGGT CATCGATATT TTCCGCCAGG CTGAACAGGG CGAGCCGCAG GCGCTCGCGG TACTGGAGAA TACCGCACGG ATTGCGGCGC TGGGTGTCGC TTCCGCGGTG AGCCTGTTGA ACCCCGAATG GCTGATTCTG GGCGGCGGCA TCGGCGCGCG GCCGGCGTTC CATGAACGGG TTCGCCAGCA GGTTGAGGCG TTGATCCCGG TGCCGGTACG GCTTACCGGC AGCGCTCTGT TGGACGATGC GGGCGTCGTC GGCGCCGTCC ATCTGGCCAG AGAAGCCTGC CTGACGGCGT TGTCTTGGCA TGATGTGGGA GAACCGGCAT GA
|
Protein sequence | MANSQPLGKT LANALSQLER LSLEPISGWA SVLDIPLASA QQLMEFLEKQ DIIQRKPQGI ELHPQSPVVI GFDLGGTKVK GRLATLAGEV LAQTAHPTRK GDEQAAMQQM SSLAEDLLSQ AGVSSQRLKQ IAIGIPGSID KQGNVQLSPN LRLPARLPAV LSLADGKPCP TVFENDVNLA ALGEYHYGHG KGSDSLVFVA FGTGVGMGII AQGGIISGHS GMAGEIALLP LSATPYEDAR ISVGGVFEDR VSSSAIRQRY QGGNIEVIDI FRQAEQGEPQ ALAVLENTAR IAALGVASAV SLLNPEWLIL GGGIGARPAF HERVRQQVEA LIPVPVRLTG SALLDDAGVV GAVHLAREAC LTALSWHDVG EPA
|
| |