Gene Dd703_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0001 
Symbol 
ID8086532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp188 
End bp1576 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content53% 
IMG OID644834067 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_002985642 
Protein GI242237461 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.138659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACTTT CGCTTTGGCA GCAATGTCTT GCCCGTTTGC AGGATGAACT ACCTGCCACA 
GAATTCAGTA TGTGGATACG CCCGTTGCAG GCGGAATTGA GTGACAACAC GCTGGCGCTT
TATGCCCCCA ATCGTTTTGT GCTGGATTGG GTTCGTGATA AATATTTAAA TAATATCAAT
GGATTGCTGA ACGATTTTTG TGGAATGGAT GCGCCGCTGT TGCGTTTTGA AGTCGGCAGC
AAACCGGTTT CCGCAGTACC TGTTTCATCG GTGGGAAACA GTATTGCCGC GCCGGTGCCG
CAGGTTCGGG CCGCTTCGCT GATGCGGCCC AGCTGGGATA CCCAATCGGC GCCGACGGAG
CACACCTATC GCTCCAATGT GAATCCCAAA CATACGTTCG ACAATTTCGT CGAGGGTAAA
TCCAACCAGT TGGCTCGCGC GGCCGCGCGC CAGGTGGCGG ATAACCCGGG CGGCGCCTAT
AACCCGCTGT TTCTTTACGG TGGAACCGGC CTGGGTAAAA CCCATCTGTT GCATGCGGTA
GGCAATGGCA TCATGGCGCG CAAACCGAAT GCGAAAGTGG TTTACATGCA TTCCGAGCGC
TTTGTGCAGG ACATGGTGAA AGCGTTGCAG AACAACGCGA TTGAAGAGTT CAAACGCTAT
TACCGCTCGG TGGACGCGCT GCTGATCGAT GACATCCAGT TTTTTGCCAA TAAAGAGCGT
TCGCAGGAAG AATTTTTCCA CACCTTTAAC GCCCTGCTTG AAGGTAATCA GCAGATCATT
CTGACCTCAG ATCGTTACCC GAAAGAGATC AATGGGGTGG AGGATCGTTT GAAATCCCGT
TTTGGTTGGG GATTGACCGT GGCGATCGAA CCGCCCGAGC TGGAAACCCG CGTAGCGATC
CTGATGAAAA AGGCTGACGA GAATGATATC CGTCTGCCGG GCGAAGTGGC GTTTTTCATC
GCCAAACGCC TGCGTTCCAA TGTGCGCGAA CTGGAAGGCG CGCTGAACCG TGTGATTGCC
AACGCCAATT TTACCGGCCG GGCGATTACC ATCGATTTCG TGCGTGAAGC GCTGCGCGAT
TTGCTGGCGT TGCAGGAAAA GCTGGTCACT ATCGACAACA TTCAAAAGAC GGTGGCGGAA
TACTATAAGA TCAAAGTAGC GGATCTTTTA TCCAAGCGCC GTTCCCGTTC GGTGGCGCGC
CCGCGCCAGA TGGCGATGGC GCTGGCCAAA GAGCTCACTA ACCACAGCCT GCCGGAAATC
GGTGATGCGT TTGGCGGCCG TGACCATACC ACCGTGCTGC ACGCTTGTCG TAAAATTGAG
CAGCTGCGTG AAGAAAGTCA CGACATTAAA GAAGATTTTT CCAATTTAAT CCGGACCTTA
TCGTCATAA
 
Protein sequence
MSLSLWQQCL ARLQDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN 
GLLNDFCGMD APLLRFEVGS KPVSAVPVSS VGNSIAAPVP QVRAASLMRP SWDTQSAPTE
HTYRSNVNPK HTFDNFVEGK SNQLARAAAR QVADNPGGAY NPLFLYGGTG LGKTHLLHAV
GNGIMARKPN AKVVYMHSER FVQDMVKALQ NNAIEEFKRY YRSVDALLID DIQFFANKER
SQEEFFHTFN ALLEGNQQII LTSDRYPKEI NGVEDRLKSR FGWGLTVAIE PPELETRVAI
LMKKADENDI RLPGEVAFFI AKRLRSNVRE LEGALNRVIA NANFTGRAIT IDFVREALRD
LLALQEKLVT IDNIQKTVAE YYKIKVADLL SKRRSRSVAR PRQMAMALAK ELTNHSLPEI
GDAFGGRDHT TVLHACRKIE QLREESHDIK EDFSNLIRTL SS