| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2285 |
|---|
| Symbol | |
|---|
| ID | 8118890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2614163 |
|---|
| End bp | 2614864 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644852670 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_003004606 |
|---|
| Protein GI | 251789885 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CTGATGCTAC TGTTCTCGTC ACGGGTGCCA ACCGCGGCAT CGGGCTTGCT
TTCACAAAGG CTTTCCTGGC TCGCGGCGCT CGTAAGGTTT ATGCGGGCGC GCGCGATCCC
TCGAGCATCA CCTTACCGGG TGTTGAACCA CTGAAACTCG ACGTGACCTC GGTCAGCGAT
GTTGAGTCTG CCGTGCGTTT GGCCGGCGAC GTGAATATCG TCGTCAATAA TGCGGGCATT
GCGGCCATCG GCGGTTTTCT TGCCGATGAT GCCGAAGCCC TCCTTCGGCG CCACTTCGAA
ACAAATGTTT TCGGGGTGTT GCGCGTAAGC CGCGCGTTTG CGCCGGCGCT GGCACGCAAT
GGCGGCGGCG CACTACTCAA CGTGGCATCT ATCGGTAGTT GGCTGAGTTT TCCCATGTTA
GCGACTTATG CGACGTCCAA AGCCGCCGTC TGGAGCCTGA GCAACGGCTT GCGCAACGAA
TTGCGGGAGC AAGGAACGCA GGTGATGTCT TTGCACATGG GTTTCGTCGA TACCGACCTC
ACGAAGGGTC TCGATGCCCA GAAATCAACG CCTGAGGCGA TCGTGGAATA CGCGCTCAAT
GCGCTGGAAG CGGGTGCCGA AGAAGCGCTC GCTGACGAGC TCACCCGGCA GGTGCATAGC
GGCTTGTCGG CCGAGTCGCC GATCTATCTG ATGCCGCGCT AA
|
|---|
| Protein sequence | MKIADATVLV TGANRGIGLA FTKAFLARGA RKVYAGARDP SSITLPGVEP LKLDVTSVSD
VESAVRLAGD VNIVVNNAGI AAIGGFLADD AEALLRRHFE TNVFGVLRVS RAFAPALARN
GGGALLNVAS IGSWLSFPML ATYATSKAAV WSLSNGLRNE LREQGTQVMS LHMGFVDTDL
TKGLDAQKST PEAIVEYALN ALEAGAEEAL ADELTRQVHS GLSAESPIYL MPR
|
|---|
| |