Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1680 |
Symbol | rlmL |
ID | 8117881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1920420 |
End bp | 1922543 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644852072 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_003004012 |
Protein GI | 251789291 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.719337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCTC TGTTTGCCAG CACGGCGCGT GGTCTGGAAG AATTGTTAAA AAGTGAGCTT GAAGCGCTGG GCGCGCAGCA CTGCACGGTG GTGCAGGGCG GGGTGCACTT TCAGGGAGAC GATCGGCTGA TGTACCAAAG CCTGATGTGG AGTCGACTGG CGTCGCGCAT CCTGCTGCCG CTCAACGAGT TTAAAGTCTA TAGCGATCTG GATCTGTATC TGGGTGTGCA AGCGGTGGAC TGGAGCGCGG TGTTTGACGT TAATCACACC TTTGCCGTGC ATTTTACCGG CACCAATGAC GAGATTCGCA ACAGCCAGTA CGGCGCGCTT AAGGTGAAAG ACGCGATTGT CGACAGCTTT AGCCGTAAAA CCGGCCAGCG CCCGGATGTT GCCCGTCAGC AGCCCGATAT CCGCATTAAT GTGTTTTTGC AACGCGAAAA GGCCAGCGTC GCACTGGATC TCAGCGGCGA GAGCCTGCAT CTGCGCGGCT ATCGCGAGAT GGCCGGGCAG GCGCCGCTGA AGGAGAACCT GGCGGCGGCG ATTGTGCTGC GTTCGGGCTG GGAAACCGGT ACGCCGATGG TAGACCCGAT GTGCGGCTCC GGCACGCTGC TGATTGAAGC GGCGATGATA GCCGCCGATC GCGCGCCTGG GTTGCATCGC CGGCACTGGG GTTTTCTGGC CTGGCAAAAA CATAATCCGA CGCTGTGGAA AAGCGTCGCC ACCGAAGCGC AGGAGCGAGC CCAGGCCGGT TTGCAGGCGA CCACCTCCTG TTTCTTCGGT TCCGATATCG ACCGCCGCAT GGTGGAGATT GCCGCCGGTA ACGCGCGCCG CGCCGGGGTG AATGCGTTGA TTCGGTTTGA CGCCCATGAC GCCACGCAAT TGAAAAACCC CTTGCCGCAG GGGCCGACAG GCACGGTGGT CAGCAACCCG CCTTACGGCG AGCGACTGGA AAGCGAACCG GCGCTGATTG CGCTGCACAA CCTGCTTGGC CGCAAAATGA AAAGCGAGTT CGGCGGCTGG AAGCTGTCGC TGTTTAGCGC CTCGCCGGAA CTGCTCAGTT GCCTGCAACT GCGTGCCGAT CGCCAGTTCA AGGCCAAGAA CGGCCCGCTG GAGTGCGTAC AGAAGAATTA TCAACTGGCG GAAAAGGAAA ACGGCGCGGA AAACACGGCA ACCTTTGCTG AGGATTTCGC CAACCGTCTG CGCAAGAACC TGCGCAAGCT GGAAAAATGG GCCGCACAGC AGGGCATTGA GTGTTATCGG CTGTATGACG CCGACCTGCC GGAATATAAC GTGGCGGTAG ACCGCTACGG CGATCGGGTG GTGATTCAGG AATACGCGCC GCCGAAAAGC GTCGATGCTC AGAAGGCTCG CCAGCGGTTG TTCGATGTGA TTAACGCCAC CCTGAGCGTG CTGGAACTGC CCGCCAGCCA CCTGGTGTTG AAAACCCGCG AACGTCAGAA AGGCAAAAAC CAGTACGAAA AACTGGCCGA AAAAGGCGAG TTTTTACAGG TGTCGGAGTT CAACGCCAAA CTGTGGGTTA ACCTGACCGA CTATCTGGAC ACCGGGCTGT TTCTCGATCA CCGCATCGCC CGCCGGATGC TGGGCGAGAT GAGCCGCGGC AAGGATTTCC TCAACCTGTT CGCTTACACC GGCAGCGCCA GCGTGCACGC CGGGCTTGGC GGCGCGCGTT CCACTACCAC GGTGGATATG TCGCGCACCT ATCTGGAATG GGCGGAGAAG AACCTGCGCC TTAACGGCCT GACCGGTCGT CAGCATCGGC TGATCCACGC CGATTGTCTG GCGTGGATGC GGGAGACCCA CGAACAGTTT GACCTGATTT TTATCGATCC GCCGACCTTC TCCAACTCTA AACGGATGGA CGAGTCGTTT GATGTACAGC GTGACCACCT GATGCTGATG ACCCAGCTCA AACGCCTGTT GCGCCCTCGC GGCACCATCC TGTTTTCCAA CAACAAACGC GGATTCCAGA TGGACAATGC CGGGCTGGCC GCGCTGGGGC TGGAGGCGAA GGAGATTACC GCACAAACAC TGTCGCAGGA TTTCGCCCGT AACCGTCAGA TTCACAACTG CTGGCTGCTG AAACACGCCG GCGAGGAAAA ATAA
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Protein sequence | MNSLFASTAR GLEELLKSEL EALGAQHCTV VQGGVHFQGD DRLMYQSLMW SRLASRILLP LNEFKVYSDL DLYLGVQAVD WSAVFDVNHT FAVHFTGTND EIRNSQYGAL KVKDAIVDSF SRKTGQRPDV ARQQPDIRIN VFLQREKASV ALDLSGESLH LRGYREMAGQ APLKENLAAA IVLRSGWETG TPMVDPMCGS GTLLIEAAMI AADRAPGLHR RHWGFLAWQK HNPTLWKSVA TEAQERAQAG LQATTSCFFG SDIDRRMVEI AAGNARRAGV NALIRFDAHD ATQLKNPLPQ GPTGTVVSNP PYGERLESEP ALIALHNLLG RKMKSEFGGW KLSLFSASPE LLSCLQLRAD RQFKAKNGPL ECVQKNYQLA EKENGAENTA TFAEDFANRL RKNLRKLEKW AAQQGIECYR LYDADLPEYN VAVDRYGDRV VIQEYAPPKS VDAQKARQRL FDVINATLSV LELPASHLVL KTRERQKGKN QYEKLAEKGE FLQVSEFNAK LWVNLTDYLD TGLFLDHRIA RRMLGEMSRG KDFLNLFAYT GSASVHAGLG GARSTTTVDM SRTYLEWAEK NLRLNGLTGR QHRLIHADCL AWMRETHEQF DLIFIDPPTF SNSKRMDESF DVQRDHLMLM TQLKRLLRPR GTILFSNNKR GFQMDNAGLA ALGLEAKEIT AQTLSQDFAR NRQIHNCWLL KHAGEEK
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