| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0004 |
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| Symbol | gyrB |
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| ID | 8118949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3778 |
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| End bp | 6189 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644850386 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_003002377 |
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| Protein GI | 251787656 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATT CTTATGACTC CTCAAGTATC AAGGTATTAA AAGGGCTGGA TGCGGTCCGT
AAACGCCCGG GGATGTATAT CGGTGATACG GATGACGGAA CCGGTCTGCA TCACATGGTA
TTCGAGGTGG TGGACAACGC TATCGACGAA GCGCTCGCAG GCTACTGTAA AGATATTGTC
GTTACTATTC ATGCGGATAA CTCGGTATCG GTGCAGGATG ACGGCCGTGG TATTCCCACC
GGCATCCACG AAGAAGAGGG CGTATCCGCC GCCGAAGTGA TCATGACCGT GCTGCACGCG
GGCGGTAAGT TCGACGACAA CTCCTACAAG GTATCCGGCG GTCTGCACGG GGTGGGGGTA
TCGGTCGTGA ACGCCCTGTC CGAGAAACTG GAACTGGTTA TCCGCCGTGA AGGCAAAATT
CATCGTCAGG AATACAAACA TGGCGAACCG CAGGCGCCGC TGGGTGTGAT CGGCGATGCC
GACGCCACCG GCACCACGGT GCGTTTCTGG CCGAGTCTGG AAACTTTCAC CAATGTGGTC
GAGTTTGAAT ATGACATTCT GGCCAAGCGC CTGCGCGAGT TGTCGTTCCT CAACTCCGGC
GTATCCATTC GTCTGCGCGA CGAACGCGAA GCAAACAAAG CCGACCATTT TCACTACGAA
GGCGGCATCA AGGCGTTTGT TGAATACCTG AACCGCAACA AGACGCCGAT TCACCCGCAG
GTGTTCTATT TCAGCGCCGA AAAAGACGAC ATCGGCGTGG AAATCGCGAT GCAATGGAAC
GATGGTTTCC AGGAAAACAT CTACTGCTTT ACCAACAATA TTCCGCAGCG TGACGGCGGT
ACTCACCTGG CGGGTTTCCG CGCCGCCATG ACCCGTACGC TCAACAACTA TATGGACAAG
GAAGGCTACA GCAAGAAAGC CAAAGTCAGC GCCACCGGCG ATGACGCGCG CGAAGGGCTG
ATTGCGGTGG TATCGGTGAA GGTGCCGGAC CCGAAATTCT CTTCCCAGAC CAAAGATAAG
CTGGTGTCTT CCGAGGTGAA GTCGGCGGTG GAATCGCTGA TGAACGACCG TCTGGTGGAC
TACCTGATGG AAAACCCCAA CGACGCTAAA ATCGTGGTCG GCAAGATCAT CGACGCCGCC
CGCGCCCGTG AAGCCGCACG CAAAGCGCGT GAGATGACCC GCCGCAAGGG CGCGCTGGAT
CTGGCCGGTT TGCCGGGCAA GCTGGCAGAT TGTCAGGAGC GCGACCCGGC GCTGTCCGAA
CTGTACCTGG TGGAGGGTGA TTCCGCGGGC GGTTCCGCCA AGCAGGGCCG CAACCGTAAG
AATCAGGCCA TTTTGCCGTT GAAAGGTAAG ATTCTGAACG TGGAAAAAGC GCGTTTCGAC
AAGATGCTGT CTTCGCAGGA AGTGGCGACG CTGATCACCG CGCTGGGTTG CGGTATCGGC
CGCGATGAGT ACAACCCGGA CAAACTGCGT TACCACAACA TCATCATCAT GACCGATGCC
GACGTCGACG GTTCTCATAT TCGTACTCTG TTGCTGACCT TCTTCTATCG CCAGATGCCG
GAAATCGTCG AGCGTGGTCA TGTGTTTATC GCCCAGCCGC CGTTGTACAA GGTGAAGAAA
GGCAAACAGG AACAGTACAT CAAAGACGAC GAGGCGATGG ATCAGTACCA GATTATGCTG
GCGCTGGATG GGGCCACGCT GCACACCAAC GCCCATGCCC CGGCACTGGC CGGTGAGCCG
CTGGAGAAAC TGGTGGCCGG GCACTACGGC GTACAGAAGC TGATCGATCG TATGGAGCGT
CGTTACCCGC GTGCGCTGCT TAATGCATTG ATTTATCAGC CGTCTCTGAC GGAGACGATG
CTGAACTCGC AGGCAGAGGC TCAGTCGTGG ATGGAAGCAC TGATTCAGTA CCTCAATGAA
AAAGAGCAGC ACGGCAGTAC GTACAGCTTC ATCCTGCGTC AGGTCAATGA GCGTCACGAG
CCGGTATTGC GCGTACGTAC CCACGGCGTG GATTCAGATT ACGCACTGGA TCTGGCGTTT
GTGCAGGGCA ACGAGTATCG CAAAATCAAT GGGCTGGGTG AGAAGCTGCG TGGTTTGATC
GAAGACGGCG CTTTTGTTGA GCGTGGTGAA CGTAAACAGC CGGTCGTCAG CTTCGAGCAG
GCGTTGGACT GGCTGGTGAA AGAGTCGCGC CGTGGTCTGG CGGTTCAGCG CTACAAAGGT
CTGGGCGAAA TGAACCCGGA ACAGCTGTGG GAAACCACTA TGGACCCGGA AAGCCGCCGT
ATGCTGCGTG TGACGGTGAA AGACGCCATC GCCGCCGACG AGTTGTTTAC CACTCTGATG
GGGGACGCCG TTGAACCGCG CCGCGCCTTT ATCGAAGAAA ACGCCCTGAA AGCAGCGAAT
ATTGATATTT GA
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| Protein sequence | MSNSYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNAIDE ALAGYCKDIV
VTIHADNSVS VQDDGRGIPT GIHEEEGVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSEKL ELVIRREGKI HRQEYKHGEP QAPLGVIGDA DATGTTVRFW PSLETFTNVV
EFEYDILAKR LRELSFLNSG VSIRLRDERE ANKADHFHYE GGIKAFVEYL NRNKTPIHPQ
VFYFSAEKDD IGVEIAMQWN DGFQENIYCF TNNIPQRDGG THLAGFRAAM TRTLNNYMDK
EGYSKKAKVS ATGDDAREGL IAVVSVKVPD PKFSSQTKDK LVSSEVKSAV ESLMNDRLVD
YLMENPNDAK IVVGKIIDAA RAREAARKAR EMTRRKGALD LAGLPGKLAD CQERDPALSE
LYLVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKLR YHNIIIMTDA DVDGSHIRTL LLTFFYRQMP EIVERGHVFI AQPPLYKVKK
GKQEQYIKDD EAMDQYQIML ALDGATLHTN AHAPALAGEP LEKLVAGHYG VQKLIDRMER
RYPRALLNAL IYQPSLTETM LNSQAEAQSW MEALIQYLNE KEQHGSTYSF ILRQVNERHE
PVLRVRTHGV DSDYALDLAF VQGNEYRKIN GLGEKLRGLI EDGAFVERGE RKQPVVSFEQ
ALDWLVKESR RGLAVQRYKG LGEMNPEQLW ETTMDPESRR MLRVTVKDAI AADELFTTLM
GDAVEPRRAF IEENALKAAN IDI
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