| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0912 |
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| Symbol | alaS |
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| ID | 6025915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 973336 |
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| End bp | 975978 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641593724 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001717057 |
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| Protein GI | 169831075 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00106674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCA GTGAAATCCG TAAGCGTTAT CTGGAATTCT TCGCGGCCCG GGGGCACCGG
GTTATTCCGA GCGCGTCCCT GATTCCGGGT AACGACCCCA CGCTCCTGTG GACGTCGGCC
GGCATGGTGC CGTTCAAGCC GTATTTCACC GGCGTGGCCA CTCCCGAGTT CCGGCGGGTG
GTCACCTGTC AGAAGTGCCT GCGCACCCCC GACATCGAAA TGGTGGGCAG AACGGCGCGC
CACCACACCT TCTTCGAAAT GCTCGGAAAC TTCTCCTTCG GCGACTATTT CAAGGAGCGC
GCCATCCCCT GGGCGTGGGA GTTCGTAACC CGGGACCTCG GGCTGGCACC GGAACACCTG
TGGATTTCCG TGTACCTGGA TGACAACGAG GCCTTTGATC ACTGGCGCGG TCTGGGCGTG
CCCGCGGAAC GGATCGTGCG CCTGGGCCGG GATACCAACT TCTGGGAGAT AGGCGTCGGC
CCCTGCGGCC CCTGTTCGGA AGTCTATTAC GACCGCGGGC CGGCGTACGG TTGTGAGAGC
GCTTCCTGCG GTCCGGGTTG TGACTGCGAC CGGTGGCTGG AAATCTGGAA CCTCGTGTTC
ATCCAGTATT TCCGTAATGA AGCGGGAGAC TATTCCCCCC TGGAAAGCCC GGGAATTGAC
ACCGGGATGG GACTGGAACG GGTGGCGTCC GTACTCCAGG GTGTAAATAC CAACTTTGAC
ACCGACCTTT TCCGCGGTCT GATTGACTAC ACGGCTGGGG TGCTCGGCGT GCGGTACGGC
GATGACCCGG CCGGTGACGC GGCCCTGAAA GTCATCGCCG ACCACGGCCG GGCCATCACC
TTTGCGATCG CGGACGGGGT GCTGCCCTCC AACGAGGGCC GCGGCTACGT CATTCGCCGC
CTGTTGCGCC GGGCCGTCCG GAAAGCCCTG CTTCTGGGCC GGGAAAAGCC GTTCCTGGAA
GGGGTGGCGC TGGCGGTCAT CGAACAGATG GCCGGTGCTT ATCCGGAACT GGAGACGGCG
CGGGACAGTG TGCGCAAAGT CGTTCGTTTT GAAGAAGAGC GGTTCCGCCA GACTCTGACT
CAGGGGAACG AAATTATCGG CCGCCTGATC GCCGAGGCCC GGGCCGAGAA ACGCTCCACT
CTCGAGGGTG CCGCCGCCTT CCAGCTTTAC GATACCTACG GTTTTCCCCT GGAACTGACG
CGGGAGATCT GCGCCGAGCA GGGCCTCGCG GTGGACGAAG CCGGGTTTGA GGCGGCGTTG
AAGGCCCAAC AGCAGAAGGC GCGCTCAAGC CGCCGGGAAA CAAGGTACGT GGAGGAGCGG
GAGACCTTCT TCCGGAACCT GCGTGACGAG ATCGGCCTGA CCAGGTTTGT GGGGTACGAG
CAGTTGGAGG CCGACGCCGG CGTACGGGCT CTAATTCGCG ACGGGCAACG GGTGCCTGCG
GCCGGTTCCG GGGAACAGGT CAGCCTGGTG GTGGACACCA CCCCCTGTTA CGCCGAGTCC
GGTGGCCAGG TGGGTGATCA CGGCCTGATC GAGGGGGAAA ACGTCAGGGG CCGGATCACG
GATACCTTCG CCCCGGTGGA GGGGCTCCAC GTACACGAGG TGGTGGTAGA GGCAGGCGTA
CTGGAAGAGG GGGCCCGCAT CCGGATTCTC GTGGACGGCT CCAGGCGCCG GAAGATCTGC
CGGAATCACA CCGCCACGCA CCTCCTGCAC CGCACCCTGA AAGCAGTTCT CGGCACCCAC
GTGAACCAGG CCGGTTCCTT GGTGGCCCCG GAGCGCCTGC GGTTTGACTT CACCCACATT
CAGCCTCTTT CAGAGGCGGA ACTGGCTGAA GTGGAGAGCC GGATCAACGA GATCGTGCTT
TCCAACCTGC GTGTAGAGAG TTTTCAGACC TCCTTCGACC GGGCCCGGGA ACTGGGGGCG
GTCGCCCTCT TTGGAGAGAA ATACGGGGAC CTAGTCCGCG TGGTTCAAAT CGACGGGGTG
AGCATGGAAC TGTGCGGCGG CACCCACGTG CTGTCCACAG CGGAGATCGG GCCGGTGAAG
ATCACTGCGG AAAGCAGTGT CGGGGCCGGG TTGAGACGGT TGGAAGCCGT TACCGGCATG
GAAGCGCTCG CGTTTCTGAA TTCCCGGAAC GAGCAGTTGC ACCGGATCGC CCAGGCGGTG
CGCGTACCGG TGTCCGAACT GGTGGTACAC GTCGAGCGGC TGCTTGACCA CCAGAAAAAA
CTCCAGCGCG AAAACGAACA ACTGCAGGAC CGCCTGCAGG TTTATGAGGT CAAAGAACTC
CTGGACCGGG CGAGTACGCA CGAAGGCGTG AGAATCCTGG CGACCAGCGT ACGGGCACGC
GACATGGCCG AGTTGCGCAG CATGCTGGAC CTTCTACGCG AGCGGTTGGG CTCGGCGGTG
ATTGTGCTCG GCTCGGCGGT GAACGGTAAG GTGAGCCTGG TTGCGTCCGT ATCGCGGGAT
CTGGTGGCGC GTGGACTGCA CGCCGGGGCG ATAATAAAAG AGGCGGCGGC GGTGGCCGGA
GGCGGCGGCG GTGGCCGACC CGAAATGGCC CAGGCCGGCG GAAAAAACCC CGAAAAGCTG
ACGGAAGCCT TGGAAAAGGC CCGCCAAGTG GTTCTGCGCC GGGTAGACGG CGGCTCCGCC
TAG
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| Protein sequence | MNSSEIRKRY LEFFAARGHR VIPSASLIPG NDPTLLWTSA GMVPFKPYFT GVATPEFRRV
VTCQKCLRTP DIEMVGRTAR HHTFFEMLGN FSFGDYFKER AIPWAWEFVT RDLGLAPEHL
WISVYLDDNE AFDHWRGLGV PAERIVRLGR DTNFWEIGVG PCGPCSEVYY DRGPAYGCES
ASCGPGCDCD RWLEIWNLVF IQYFRNEAGD YSPLESPGID TGMGLERVAS VLQGVNTNFD
TDLFRGLIDY TAGVLGVRYG DDPAGDAALK VIADHGRAIT FAIADGVLPS NEGRGYVIRR
LLRRAVRKAL LLGREKPFLE GVALAVIEQM AGAYPELETA RDSVRKVVRF EEERFRQTLT
QGNEIIGRLI AEARAEKRST LEGAAAFQLY DTYGFPLELT REICAEQGLA VDEAGFEAAL
KAQQQKARSS RRETRYVEER ETFFRNLRDE IGLTRFVGYE QLEADAGVRA LIRDGQRVPA
AGSGEQVSLV VDTTPCYAES GGQVGDHGLI EGENVRGRIT DTFAPVEGLH VHEVVVEAGV
LEEGARIRIL VDGSRRRKIC RNHTATHLLH RTLKAVLGTH VNQAGSLVAP ERLRFDFTHI
QPLSEAELAE VESRINEIVL SNLRVESFQT SFDRARELGA VALFGEKYGD LVRVVQIDGV
SMELCGGTHV LSTAEIGPVK ITAESSVGAG LRRLEAVTGM EALAFLNSRN EQLHRIAQAV
RVPVSELVVH VERLLDHQKK LQRENEQLQD RLQVYEVKEL LDRASTHEGV RILATSVRAR
DMAELRSMLD LLRERLGSAV IVLGSAVNGK VSLVASVSRD LVARGLHAGA IIKEAAAVAG
GGGGGRPEMA QAGGKNPEKL TEALEKARQV VLRRVDGGSA
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