Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2579 |
Symbol | |
ID | 3567419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2776744 |
End bp | 2777319 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637681044 |
Product | NapC/NirT cytochrome c, N-terminal |
Protein accession | YP_285780 |
Protein GI | 71908193 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 0.123088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.367368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA TTCTCAGATC GCTACGCCAA CCAAGCACTA AATATTCACT TTTGGGCTTG CTCTCTATAG GCTTTATCGC AGGCATCTTC TTTTGGGGGG GCTTTAATAC CGTAATGGAA GCCACCAACA CACTTGAATT CTGTATTTCA TGTCATGAAA TGCGTGACAA CGTATATCAG GAATACAAGG AAACCATTCA CTTTACCAAT CGCACTGGCG TTCGCGCCGT TTGCTCGGAC TGCCATGTAC CCAAGGACTG GGGCCACAAG ATGATGCGCA AGATCCAAGC GAGTGGCGAA GTCTACGGCA AACTCATGGG AACCATTGAT ACCAAGGAAA AGTTTGAAGC CAAGCGCCTC GAACTAGCCG AACACGAATG GGCACGAATG AAAGCCAGCG ATTCGCGCGA ATGCCGCAAC TGTCACAGTT TTGAAGGCAT GAACACGGAA AAGCAAAAAT TACGCGGTGC CAAAATGCAC AAAATCGCTC AGGACGATAA AAAGACCTGT ATCGATTGCC ACAAAGGTAT CGCCCACCGC AAACCGAAAG GTATGAAAGA GGAAGATGAC GAGTGA
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Protein sequence | MKNILRSLRQ PSTKYSLLGL LSIGFIAGIF FWGGFNTVME ATNTLEFCIS CHEMRDNVYQ EYKETIHFTN RTGVRAVCSD CHVPKDWGHK MMRKIQASGE VYGKLMGTID TKEKFEAKRL ELAEHEWARM KASDSRECRN CHSFEGMNTE KQKLRGAKMH KIAQDDKKTC IDCHKGIAHR KPKGMKEEDD E
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