| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2408 |
|---|
| Symbol | |
|---|
| ID | 3568064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2597047 |
|---|
| End bp | 2598954 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637680875 |
|---|
| Product | asparagine synthase, glutamine-hydrolyzing |
|---|
| Protein accession | YP_285614 |
|---|
| Protein GI | 71908027 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03108] exosortase 1 system-associated amidotransferase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TCACTGGCAT TTTCGACACC CGAAGCAAAC GCGATATTGA TCGTGCCGTT
CTGCACCGCA TGAACGAATC GCAGATCCAT CGCGGTCCAG ACGAAGGCGG TACCCATGTC
GAACCCGGCG TCGGGCTCGG CCATCGCCGG CTGTCGATCA TTGACCTGTC CACCGGCCAG
CAGCCTCTTT ACAACGAGGA CAATAGTGTT TGCGTCGTCT TCAACGGCGA AATCTACAAC
TATCAGGAAC TGATTCCGGA ATTGCAGGCG CTCGGCCACG TTTTCCACAC CCGTAGCGAT
ACTGAAGTCA TCGTGCACGC TTGGGAAGCC TGGGGCGAAA GCTGCGTCGA CCGCTTCCGT
GGGATGTTTG CCTTCGCACT GTGGGACCGC AATAGGGAAA CGCTCTTCTT GGCCCGCGAC
CGCCTCGGCG TCAAGCCACT GTTTTATGCC CTCCTCGACG ACGGCACCTT TCTTTTCGGT
TCCGAACTCA AATCCCTGCT CGCCCACGGC GGCCTCAAGC GCGACATCGA TCCTTGTGCC
GTCGAGGAAT ACTTCGCCCT TGGCTACGTA GCCGAACCGC GGTCCATCTT CAAGCAGGCA
TTGAAGCTCC CCCCCGCCAG TACCCTGCTG GTGCGCCGTG GCCAGCCGGT CGGCACTCCC
CGTGAGTACT GGGACGTCCG TTTCACCCTC GACAATCCGA TCAGCGATGC AGATGCCCAG
GCCGAGCTGA CGCACCGTTT GGAAGAATCA ATCAAACTTC GCATGATCTC GGAAGTGCCA
CTCGGCGCCT TTCTTTCCGG CGGAGTCGAT TCCAGCGCTG TTGTCGCCCT CATGGCCGGC
CTCTCGCAGA AACCGGTCAA TACCTGCTCG ATCGGATTCT CCGATCCAGC CTTCAACGAA
TCCGAGTTCG CCAAGATGGT GGCCGACCGC TACCAGACCA ACCATCACCT CGACATCGTC
GAAAGTGACG ACTTCGACCT GATCGACACA CTGGCCCGAC TCTACGACGA GCCCTACGCC
GACAGCTCGG CCATCCCCAC CTATCGCGTC TGCCAGCTCG CCCGCAAGCA TGTGACCGTT
GCCCTCTCCG GCGATGGCGG CGACGAGAGT TTCGGCGGCT ATCGCCGCTA CCGGCTGCAC
ATGATGGAAG AGAAAATGCG CTCGGCACTG CCACTTGGCC TGCGCCGTCC GCTCTTCGGT
GCGCTGGGCA AGCTCTATCC GAAAGCCGAC TGGGCACCGC GCGTCTTCCG CGCCAAGACG
ACCTTTGAAG GCATGGCTCG CAACTCTGTG GAAGCCTATT TCCACTCTGT CTCAATCCTG
CGCGCCCCGA TGCGCGACCG GCTGTTCAGT ACCCAGTTCA AGTCTGCGCT CAGTGGTTAT
GATGCCCTCA AGGTATTCAC CGACCATGCG GCAAAGGCAG ACACCACTGA CCCGCTGGCG
CTGATCCAGT ATCTCGATCT AAAAACCTAC CTGATCGGCG ACATCAACAC CAAGGTCGAC
CGTGCCAGCA TGGCCCATTC ACTGGAAGTA CGCGAACCGC TGATGGACCA CAAGCTGGTC
GAATGGCTCG CCACCCTGCC CTCGACGCTG AAAATCCGAG GCCAGGAAGG AAAATATCTG
CTGAAGAAGA GCATGGAACC GCATCTGCCG AACGACGTCC TCTATCGTCC CAAGATGGGC
TTTAGCGTGC CGCTCGCTCG CTGGTTCCGC GGCCCGCTCA AGACGCGGGT GCAAGAGTCC
ATCCTTGGAT CACGACTGGC CGATACGGGC TGGTTCAACC GCGACTACCT GCAGAAACTG
GTTACCGACC ATAACAACGG TAGCCGAGAC TACAGTGCTT CGATCTGGAC CATTCTGATG
TTCGAAGCCT TCCTGCGCAA CGTCATGGAA CAAGGCGAAG CCGCATGA
|
|---|
| Protein sequence | MCGITGIFDT RSKRDIDRAV LHRMNESQIH RGPDEGGTHV EPGVGLGHRR LSIIDLSTGQ
QPLYNEDNSV CVVFNGEIYN YQELIPELQA LGHVFHTRSD TEVIVHAWEA WGESCVDRFR
GMFAFALWDR NRETLFLARD RLGVKPLFYA LLDDGTFLFG SELKSLLAHG GLKRDIDPCA
VEEYFALGYV AEPRSIFKQA LKLPPASTLL VRRGQPVGTP REYWDVRFTL DNPISDADAQ
AELTHRLEES IKLRMISEVP LGAFLSGGVD SSAVVALMAG LSQKPVNTCS IGFSDPAFNE
SEFAKMVADR YQTNHHLDIV ESDDFDLIDT LARLYDEPYA DSSAIPTYRV CQLARKHVTV
ALSGDGGDES FGGYRRYRLH MMEEKMRSAL PLGLRRPLFG ALGKLYPKAD WAPRVFRAKT
TFEGMARNSV EAYFHSVSIL RAPMRDRLFS TQFKSALSGY DALKVFTDHA AKADTTDPLA
LIQYLDLKTY LIGDINTKVD RASMAHSLEV REPLMDHKLV EWLATLPSTL KIRGQEGKYL
LKKSMEPHLP NDVLYRPKMG FSVPLARWFR GPLKTRVQES ILGSRLADTG WFNRDYLQKL
VTDHNNGSRD YSASIWTILM FEAFLRNVME QGEAA
|
|---|
| |