Gene Daro_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2258 
Symbol 
ID3566348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2445131 
End bp2446522 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content59% 
IMG OID637680725 
Productheavy metal sensor kinase 
Protein accessionYP_285465 
Protein GI71907878 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTGA TCGGGAAAAA ATCCGTCACC TTTCGGCTGA CCATGCTTTT TGCATCGGTC 
TCGACCACGG TGCTTCTTAT GCTGGGACTG CTGATCGGCT CGCTCGTCGA GGGGCATTTC
GAAGAACTGG ACATGGAACT GCTCGGCGGA AAAATGGAAT TGCTCCGCCA CGCTTTGGAG
AAAGTGCGCT CCCCCCAGGA ACTGGAAGCG CTGCCGGGAC AACTGGAAGA TTCGCTGGTC
GGACACCACG GTTTGGCGGT GCGCATCTTG AAAGTGGACG GTCAGCTCCT GTATGCGACG
GAAGGATCGA CGTTCCCACC TGGACTGCTT GCCGATGCCG GGAAGCTGCC TCTTCGTCCG
ACACTCTGGA GCGATTCGGA AAACCATCTC TATCGTGGCA TCGCCGCCCT GGCACCCACC
GGTATCCAGG GCATGGCGCC AGTTGTAGTA GCGGCGTCGA CCGACATGAC CCACCACGAG
CATTTCATGC ACTCATTCAA GGCGGCGCTT TGGTCAGTCG TGGGATTTGC CGCACTTCTC
ACTGGATTTC TTGGCTGGGT GGCGGCTCGC CGTGGTCTGG CGCCCCTTCG TGAGATTAGC
CGCTCAGCCG CTGGCATTAC CGCTAACCGC CTTAACCGGC GGTTAGCGGT GGAGTCCATT
CCCGTCGAAC TGGCAGAAGT CGCCCAAACC CTCAATGAGA TGCTGGCCCG CCTTGAAGAG
TCCTTCCGCA GGCTGTCTGA TTTCTCCTCC GATCTCGCCC ACGAACTGCG CACGCCCGTG
AGCAATCTGC TGACACAGAC CCAGGTAACG CTGTCCAAGA CGCGGACGCT TGACGAATAC
CAAGACGTGC TCGCCTCCAA CGCCGAAGAG TTCGAGCGCC TGTCGCGGAC CATTGCCGAC
ATGCTATTTT TAGCCAAGTC AGACAACGAT CTCATTGTCC CCAATCGAGA AACGGTTGAT
CTGGCGGTCG AGATCGCCAG TCTTTCTGAG TTTTACGAGG CCTGGGTCGA GGAGAAGGGC
ATTCACCTGA CCTGTTCGGG CGGCGGCCTC GTGCTTGGGG ATCGGCTGAT GCTGCGTCGG
GCCGTCGGCA ATCTGCTTTC CAACGCAGTG CGCCACACAC CGGAAAAAGG AATGATCACG
GTCTGCGTGG CCGATGCTGA CAACACGTGC ATCGTTGTGT CGGTTGAAAA TACGGGCGAG
ACCATCGCCC CGGAACATCT GCCCCGTCTG TTTGACCGCT TCTATCGGGT TGATCCGTCC
CGGCAACGAT TTGGCGAAGG CGCGGGTCTG GGGCTGGCCA TCACACGTTC CATCGCTAGT
GCCCATGGCG GTGATGTTCG TGTCCGTTCG GAGAACGGCA TCACGGCGTT CGAGATTTGG
TTGCCGGCCT GA
 
Protein sequence
MNLIGKKSVT FRLTMLFASV STTVLLMLGL LIGSLVEGHF EELDMELLGG KMELLRHALE 
KVRSPQELEA LPGQLEDSLV GHHGLAVRIL KVDGQLLYAT EGSTFPPGLL ADAGKLPLRP
TLWSDSENHL YRGIAALAPT GIQGMAPVVV AASTDMTHHE HFMHSFKAAL WSVVGFAALL
TGFLGWVAAR RGLAPLREIS RSAAGITANR LNRRLAVESI PVELAEVAQT LNEMLARLEE
SFRRLSDFSS DLAHELRTPV SNLLTQTQVT LSKTRTLDEY QDVLASNAEE FERLSRTIAD
MLFLAKSDND LIVPNRETVD LAVEIASLSE FYEAWVEEKG IHLTCSGGGL VLGDRLMLRR
AVGNLLSNAV RHTPEKGMIT VCVADADNTC IVVSVENTGE TIAPEHLPRL FDRFYRVDPS
RQRFGEGAGL GLAITRSIAS AHGGDVRVRS ENGITAFEIW LPA