| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1950 |
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| Symbol | |
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| ID | 3567879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2102758 |
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| End bp | 2103975 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637680421 |
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| Product | cysteine desulfurase IscS |
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| Protein accession | YP_285166 |
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| Protein GI | 71907579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00000000843977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.404205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGA AACTCCCCAT CTACCTGGAT TACTCGGCAA CCACCCCGGT CGACCCCCGT
GTCGCCGAAA AAATGATTCC CTACCTCTGC GAGCATTTCG GCAATCCGGC GTCGCGTTCG
CACAGCTTTG GCTGGGTCGC CGATGCGGCG GTCGAAGAGG CCCGTGAGCA GGTTGCTGCG
CTGGTCAATG CAGATCCCAA GGAAATCGTC TGGACCTCCG GTGCGACCGA ATCCAACAAC
CTTGCCATCA AGGGCGCGGC CAATTTCTAT GCCAGCACCA AGGGCAAGCA CATCATCACG
GTCAAGACCG AGCACAAGGC CATTCTCGAT ACCGTGCGTG AAATGGAGCG CCAGGGTTTC
GAGGCGACTT ATCTTGACGT CAAGGAAGAC GGTCTGCTTG ATCTGGAAGT CTTCAAGGCG
GCCATTCGTC CGGATACCGT GCTCGCCTCG GTGATGTTCG TCAATAACGA AGTCGGTGTC
ATTCAGCCGA TCGCCGAACT CGGTGAAATC TGCCGCGAGA AGGGCATCAT CTTTCACGTC
GATGCTGCAC AGGCCACCGG CAAGGTCGAT ATCGATCTGA GCAAGCTGAA GGTCGATCTG
ATGAGCTTCT GCGCCCACAA GACCTATGGT CCGAAGGGTA TCGGCGCGCT GTACGTCCGC
CGCAAGCCGC GTATCCGTCT CGAAGCCCAG ATGCACGGCG GCGGTCATGA GCGCGGTTTC
CGCTCCGGCA CCTTGCCGAC CCATCAGATC GTCGGCATGG GCGAGTGCTT CCGTTTGGCC
AAGGAAGAAA TGGCTGAAGA GAACAAGCGC GTTGGTGCTC TGCGCGACAA ATTGCTGAAG
GGCTTGCAGG ATATCGAGGC CACTTTCGTC AATGGTGACC TGACGCAACG CGTGGCGCAC
AATCTCAACA TCAGCTTTGC CTATGTTGAG GGTGAGTCGA TGATCATGGC GATCAAGGAT
CTGGCGGTTT CGTCCGGTTC GGCCTGCACC TCGGCCAGCC TGGAACCTTC CTACGTGCTA
CGTGCCCTGG GGCGTGATGA TGAACTGGCT CACAGTTCCA TCCGTTTCAG CATCGGTCGC
TTTACGACAG AAGAAGAAAT TGACTATGCA ATCAAATTGT TGCATCAGAA AGTTGGTAAG
TTGCGCGAAC TTTCACCGCT GTGGGAGATG TACAAGGATG GCATCGATCT GAGCACCGTT
CAGTGGGCAG CGCACTAA
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| Protein sequence | MTMKLPIYLD YSATTPVDPR VAEKMIPYLC EHFGNPASRS HSFGWVADAA VEEAREQVAA
LVNADPKEIV WTSGATESNN LAIKGAANFY ASTKGKHIIT VKTEHKAILD TVREMERQGF
EATYLDVKED GLLDLEVFKA AIRPDTVLAS VMFVNNEVGV IQPIAELGEI CREKGIIFHV
DAAQATGKVD IDLSKLKVDL MSFCAHKTYG PKGIGALYVR RKPRIRLEAQ MHGGGHERGF
RSGTLPTHQI VGMGECFRLA KEEMAEENKR VGALRDKLLK GLQDIEATFV NGDLTQRVAH
NLNISFAYVE GESMIMAIKD LAVSSGSACT SASLEPSYVL RALGRDDELA HSSIRFSIGR
FTTEEEIDYA IKLLHQKVGK LRELSPLWEM YKDGIDLSTV QWAAH
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