| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0966 |
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| Symbol | |
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| ID | 3570281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1049883 |
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| End bp | 1052123 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637679425 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_284192 |
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| Protein GI | 71906605 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.783688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT ATTCGGCACT CTTCACCGGC CAGACCAGCA CGCCGCAAGC GCCGGCCAGT
CACCTGACGC CGCCGAAATA CCGCCTGCTG ATCGTCGATG ACGAAGTCGG CATCGTCAAG
GCGCTGACGC GCGTATTCCG TCAGGAAAAC TATGAAGTCG TGACTGCCGG CAGCGGCAAC
GAAGGTCTGC AGCGCATGGC AGAGGGCAAT TTCCAGCTGA TCATCAGCGA CTTCATGATG
CCTGGCATGA ACGGCGCCCA GTTCCTGCGC GAGGTCAAGC AACGTTCACC GGAAACGATC
CGCATCATGC TGACCGGCCA TGCCAATACC GATGCCGTGA TGGGCGCCAT CAACGAAGGT
GCGGTATACA AATTCATCCT CAAGCCGTGG AACGATGACG ATCTGCGTGT CACCGTCGCA
CTGGCTTTGG AGCAGTTCGA CCTGATCACC CGCAACCGGG TTCTGAAGAC CGAAAACGAG
AAGAAATCCA AGGAAATCTC GGCGCTGAAT CGCCTGGCGG TGACCCACCG CAGTCGACTG
GGCATCATGC TGCACAAGAA AAACCTGCTC AACGCGGCCC AGTTGCAGGA ACTGACCTTG
CTGCAGGAGC GACGCAAGGA GCCGCTGATC GCCCTGCTCC TCGAAAAGGA CTGGATCAGC
GAGCGGCAGA TTCGCACCCT GCTCAAGTCG GAAATGCTGA TCGACGAGGT CCAGCTACCA
GAATTCCGCA TCGATGCAGT GCTGGCCGAG CTGATCCCGC ACAGTTTCTG CCAGCGCCAA
CTGGTCGTCC CGCTCAAGCT GGAAGGCCGG CGCCTGCTGC TGGCGATGGC AGACCCGCTC
GACGAGGGCC TGATCGACGA AGTTCGTTTC ACGGCCGGTC TCGACCTGAA AATTGTCACG
GCCGACACCG AGGCAATCCG CAACAAAATC AATGAGCTGT ACGGCGAAGG CGGCGTCGAT
TTCAAGGAAC TGGAGACCCT GGTCAGCAGC CCGGACCCTT ACGAGGGGAT CGAGATCGTC
ATCGAGGAGG AGGACACCGC CCAGCTCGAA GACCTGCTCC GCGAAACCGA GGCCCCGCCA
GCCATCCGTC TGGCCAACGC AATCATTCTC GAAGCCATCC GGCTCGGCGC TTCCGACATC
CACATCCAAC CCCGGATCAA GTCCGTTGTC GTCCGCTACC GGATCGACGG CGTGCTGACC
GACAAGATTC AGATCCCGCA CCACCTGCAC CAGTCGCTGG TGTCGCGCCT GAAGATCATG
TCCGAACTGG ACATTTCCGA ACGCCGGCGA CCACAGGATG GCCGGATCAC CGTCAAGACG
CCGATGCGCA TGGTGGATCT GCGCATTTCC ACCCTGCCGA CGATCAACGG CGAGAAGGTG
GTCATGCGCA TTCTCGACCG CAATTCAACG GTGCATACGC TGGACCGCCT TGGCTTCTCG
CCCGTCGACC TGCCGCGCGT CGCCGACATG GTGGCCCGGC CGCAGGGCAT CATCCTGGCG
ACCGGCCCGA CCGGCAGCGG CAAGACAACC ACCTTGTATT CGCTGCTCCA ACACGATGCA
ACACCTGACA AGAACTACGT CACCATCGAA GATCCGGTCG AGTACTACCT CGACATGGCC
GGGCAGGTCC TGGTCAAGGA AAAGATCGGT CTGACTTTCC CATCCATTTT GCGTGCCTTG
TTGCGCCAGG ATCCGGATGT TGTGCTGCTC GGCGAAATCC GTGACTTCGA AACCGCCGAG
GTGGCTTTTC ATGCCGCCCT GACCGGCCAC CTCGTTTATT CGACCCTGCA CACCAATTCG
GCGATCGCGA CGATTGCTCG CCTGTTCGAC CTTGGCCTCA AACCCTATAT TGTCGCCACG
GCGCTGGAAG GCATCATCGC TCAGCGACTG GTCCGCCAGA TCTGCCCGCA TTGCCGTACC
GAGGTCGATG CCGAGCCGGC ACTGCGGGCA AGACTGGGCG GTCACTTTGC CCTGCTTGAA
CGAAGCTATC GCGGCGCCGG CTGCAACCAC TGTCATGGCT CGGGTTACAA AGGGCGGGTC
GGTCTGTATG AAGTACTGGC GCTTGATGAC GAATTACGCG ACCGGATCGG CAGCGGTGCC
AGCGTGCTGG AAATTCGTCG CCTGGTCCGC CAGAAAGGCT TGCGGGGCAT TGGTTGCCAC
GCCTTGGAGC GCGTTCAGTC CGGCGCTACC AGCCTGGAGG AAATTCTGCG TGTTCTCGGC
CCACAGGCCG GAGAGGACTA A
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| Protein sequence | MTDYSALFTG QTSTPQAPAS HLTPPKYRLL IVDDEVGIVK ALTRVFRQEN YEVVTAGSGN
EGLQRMAEGN FQLIISDFMM PGMNGAQFLR EVKQRSPETI RIMLTGHANT DAVMGAINEG
AVYKFILKPW NDDDLRVTVA LALEQFDLIT RNRVLKTENE KKSKEISALN RLAVTHRSRL
GIMLHKKNLL NAAQLQELTL LQERRKEPLI ALLLEKDWIS ERQIRTLLKS EMLIDEVQLP
EFRIDAVLAE LIPHSFCQRQ LVVPLKLEGR RLLLAMADPL DEGLIDEVRF TAGLDLKIVT
ADTEAIRNKI NELYGEGGVD FKELETLVSS PDPYEGIEIV IEEEDTAQLE DLLRETEAPP
AIRLANAIIL EAIRLGASDI HIQPRIKSVV VRYRIDGVLT DKIQIPHHLH QSLVSRLKIM
SELDISERRR PQDGRITVKT PMRMVDLRIS TLPTINGEKV VMRILDRNST VHTLDRLGFS
PVDLPRVADM VARPQGIILA TGPTGSGKTT TLYSLLQHDA TPDKNYVTIE DPVEYYLDMA
GQVLVKEKIG LTFPSILRAL LRQDPDVVLL GEIRDFETAE VAFHAALTGH LVYSTLHTNS
AIATIARLFD LGLKPYIVAT ALEGIIAQRL VRQICPHCRT EVDAEPALRA RLGGHFALLE
RSYRGAGCNH CHGSGYKGRV GLYEVLALDD ELRDRIGSGA SVLEIRRLVR QKGLRGIGCH
ALERVQSGAT SLEEILRVLG PQAGED
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