Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5610 |
Symbol | |
ID | 5751230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6238926 |
End bp | 6239990 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641300743 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001566624 |
Protein GI | 160901042 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.519955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGGA TGAGCCGGCC GTGGCCTGTT CGGCCTGAAA GCCTCTCGCC GTCCCCCTCT TTCTTTCCTT TCTGCTTTTG CCTTCCACAG GCCCGGGCCG CACCGGCCCC GGGCGGAGCC TTGCCCATGA ACTTCCAGCA ACTGCGCTAT GTGCGCGAAA CCGTGCGCCG CGGCTACAGC CTGACCGAGG TGGCCCACAC GCTGCACACC TCCCAGCCCG GCGTGAGCCG GCAGATCCGC GAACTGGAGG AAGAACTGGG CGTGGAGATC TTCATCCGCG CAGGCAAGCG GCTGACCGGG CTGACGCCGC CCGGCGAGGC GCTGCTGCCC ATCGTCGAGC GCCTGATGCT GGAGGCCGAC AACCTGCGCC GCGTGGGCGC CGACTTCAGC GCCAGCGAGC AGGGCCGGCT GTCGATTGCC GCCACCCACT CCCAGGCCCG CTATGCGCTA CCCCATGTGG TGCGCGACTT CCGCCAGCGC TATCCGCAGG TGCGCCTGCA CCTGCACCAG GGCTCGCCCG AGCAGGTGGC GCAGATGCTG CGCAGCGGCG AGGCCGACAT CGGCGTGGCC ACCGAGGCGC TGGCCGGCTA TGAAGGCCTG GTCGCGCTGC CCTGCTACCG CTGGACGCAC GGCGTGGTCG TGCCGCCGGG CCACCCGCTG CTGCAGTCGC AGCAGGCGCT GACGCTGGAG GCGCTGTCGC GCTTTCCCAT CATCACCTAC GAGCAGGGCT ATACGGGCCG CGCCCACATC GACGAGGCCT TTGCGCGCGA AGGCCTGGAG CCCGACGTGG TGCTCACGGC CATGGACGCC GACGTGATCA AGACCTATGT GGAGCTGGAC ATGGGCGTGG GCATCGTCGC CTCGGTGGCG CTGGATGCCG AGCGTGACCA GGGCCTGCGC ACGCTGGACG CCGGCCACCT GTTCGAGGTC AACACCACGC GGCTGGGCCT GCGCAAGGGC GCCTGGCTGC GCGGCTATGC CTATGCCTTC ATCGAGACCT TCGTGCCCAC GCTGACGCGC GAGGTGGTCG AGCAGGCCGT GCGCCAGGGC GTGGAGCCCG AGTAG
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Protein sequence | MPRMSRPWPV RPESLSPSPS FFPFCFCLPQ ARAAPAPGGA LPMNFQQLRY VRETVRRGYS LTEVAHTLHT SQPGVSRQIR ELEEELGVEI FIRAGKRLTG LTPPGEALLP IVERLMLEAD NLRRVGADFS ASEQGRLSIA ATHSQARYAL PHVVRDFRQR YPQVRLHLHQ GSPEQVAQML RSGEADIGVA TEALAGYEGL VALPCYRWTH GVVVPPGHPL LQSQQALTLE ALSRFPIITY EQGYTGRAHI DEAFAREGLE PDVVLTAMDA DVIKTYVELD MGVGIVASVA LDAERDQGLR TLDAGHLFEV NTTRLGLRKG AWLRGYAYAF IETFVPTLTR EVVEQAVRQG VEPE
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