Gene Daci_5610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5610 
Symbol 
ID5751230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6238926 
End bp6239990 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID641300743 
ProductLysR family transcriptional regulator 
Protein accessionYP_001566624 
Protein GI160901042 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.519955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGGA TGAGCCGGCC GTGGCCTGTT CGGCCTGAAA GCCTCTCGCC GTCCCCCTCT 
TTCTTTCCTT TCTGCTTTTG CCTTCCACAG GCCCGGGCCG CACCGGCCCC GGGCGGAGCC
TTGCCCATGA ACTTCCAGCA ACTGCGCTAT GTGCGCGAAA CCGTGCGCCG CGGCTACAGC
CTGACCGAGG TGGCCCACAC GCTGCACACC TCCCAGCCCG GCGTGAGCCG GCAGATCCGC
GAACTGGAGG AAGAACTGGG CGTGGAGATC TTCATCCGCG CAGGCAAGCG GCTGACCGGG
CTGACGCCGC CCGGCGAGGC GCTGCTGCCC ATCGTCGAGC GCCTGATGCT GGAGGCCGAC
AACCTGCGCC GCGTGGGCGC CGACTTCAGC GCCAGCGAGC AGGGCCGGCT GTCGATTGCC
GCCACCCACT CCCAGGCCCG CTATGCGCTA CCCCATGTGG TGCGCGACTT CCGCCAGCGC
TATCCGCAGG TGCGCCTGCA CCTGCACCAG GGCTCGCCCG AGCAGGTGGC GCAGATGCTG
CGCAGCGGCG AGGCCGACAT CGGCGTGGCC ACCGAGGCGC TGGCCGGCTA TGAAGGCCTG
GTCGCGCTGC CCTGCTACCG CTGGACGCAC GGCGTGGTCG TGCCGCCGGG CCACCCGCTG
CTGCAGTCGC AGCAGGCGCT GACGCTGGAG GCGCTGTCGC GCTTTCCCAT CATCACCTAC
GAGCAGGGCT ATACGGGCCG CGCCCACATC GACGAGGCCT TTGCGCGCGA AGGCCTGGAG
CCCGACGTGG TGCTCACGGC CATGGACGCC GACGTGATCA AGACCTATGT GGAGCTGGAC
ATGGGCGTGG GCATCGTCGC CTCGGTGGCG CTGGATGCCG AGCGTGACCA GGGCCTGCGC
ACGCTGGACG CCGGCCACCT GTTCGAGGTC AACACCACGC GGCTGGGCCT GCGCAAGGGC
GCCTGGCTGC GCGGCTATGC CTATGCCTTC ATCGAGACCT TCGTGCCCAC GCTGACGCGC
GAGGTGGTCG AGCAGGCCGT GCGCCAGGGC GTGGAGCCCG AGTAG
 
Protein sequence
MPRMSRPWPV RPESLSPSPS FFPFCFCLPQ ARAAPAPGGA LPMNFQQLRY VRETVRRGYS 
LTEVAHTLHT SQPGVSRQIR ELEEELGVEI FIRAGKRLTG LTPPGEALLP IVERLMLEAD
NLRRVGADFS ASEQGRLSIA ATHSQARYAL PHVVRDFRQR YPQVRLHLHQ GSPEQVAQML
RSGEADIGVA TEALAGYEGL VALPCYRWTH GVVVPPGHPL LQSQQALTLE ALSRFPIITY
EQGYTGRAHI DEAFAREGLE PDVVLTAMDA DVIKTYVELD MGVGIVASVA LDAERDQGLR
TLDAGHLFEV NTTRLGLRKG AWLRGYAYAF IETFVPTLTR EVVEQAVRQG VEPE