Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5453 |
Symbol | aspS |
ID | 5751071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6051563 |
End bp | 6053365 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641300584 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001566467 |
Protein GI | 160900885 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGC GCTCCCATTA CTGCGGTCTA GTGACCGAAG CCCTGATGGG CGAAACCGTT ACCCTGTGCG GCTGGGTGAA CCGTCGCCGC GACCATGGCG GCGTGATCTT CATCGACCTG CGCGACCGCG AAGGCTATGT GCAGGTGGTC TGCGACCCCG ACCGTGCCGA GATGTTCAAG ACTGCCGAAG GCCTGCGCAA CGAGTTCTGC GTGCAGGTCA AGGGCCTGGT GCGCGCACGT CCCGAAGGCA CGACCAACGA CAAGCTCAAG AGCGGCCAGA TCGAAGTGCT GTGCCACGAG CTGAACGTGC TCAACGCCTC GGTCACGCCC CCGTTCCAGC TGGACGACGA GAACCTGTCC GAGACCGTGC GCCTGACCAA CCGCGTGCTG GACCTGCGCC GCCCCTACAT GCAGCGCAAC ATGATGCTGC GCTACCGCAC GGCCATCCAG GTGCGCAACT TCCTGGACAA GGAAGGCTTC ATCGACATCG AAACGCCCAT GCTGGGCAAG AGCACGCCCG AAGGCGCGCG CGACTACCTG GTGCCCAGCC GCGTGCACGA CGGCGAGTTC TTCGCCCTGC CGCAGTCGCC CCAGCTGTAC AAGCAGATGC TGATGGTGGC CGGCTACGAC CGCTACTACC AGATCACCAA GTGCTTCCGC GACGAAGACC TGCGCGCCGA CCGCCAGCCC GAGTTCACGC AGATCGACTG CGAGACCTCG TTCCTGGACG AAGAGGAAAT CCGCGCCATC TTCCAGCGCA TGATCACCGA GGTCTTCAAG ACCCAGCTGG ACGTGGATCT GGGCGAGTTC CCGATGATGA CGTACCAGGA TGCGGCCTTC CGCTTCGGCT CGGACAAGCC TGACCTGCGC GTCAAGCTCG AGTTCACCGA ACTGACCGAA ATCATGAAGG ACGTGGACTT CAAGGTGTTC TCTACCCCCG CCACGACCAA GGGCGGCCGC GTGGTCGCGC TGCGCGTGCC CGGCGGCTCG CAGATCTCGC GCGGCGAGAT CGACCAGTAC ACCGAATTCG TCAAGATCTA CGGCGCCAAG GGCCTGGCCT GGATCAAGGT CAACGAAGTG GCCAAGGGCC GCGATGGCCT GCAGTCTCCC ATCGTCAAGA ACCTGCATGA CGCGGCCATT GCCGAGATCC TCAAGCGCAC GGGCGCACAG GACGGCGACC TCATCTTCTT CGGCGCCGAC AAGGAAAAGA TCGTCAACGA CTCCATCGGC GCGCTGCGCC TGAAGGTGGG TCACAGCGAA TTCGGCAAGG CCAACGGCCT GTTCGAGAAC CGCTGGGCGC CGCTGTGGGT GGTGGACTTC CCCATGTTCG AGCACGACGA GGAAAACGAC CGCTGGGCGG CCGTGCACCA TCCCTTCACC TCGCCCAAGG ACGGCCACGA GGAACTCATG GTCACCGACC CGGCCAACTG CCTGGCCAAG GCCTACGACA TGGTCCTGAA CGGCTGGGAG CTGGGTGGCG GCTCGGTGCG TATCCACCGC GCCGACGTGC AGAGCAAGGT GTTTGACGCG CTCAAGATCT CGCCCGAAGA CGCTCGCGCC AAGTTCGGCT ACCTGCTGGA CGCGCTGCAG TACGGCGCGC CCCCGCACGG TGGCCTGGCC TTCGGCCTGG ACCGCCTGAT CACGCTGATG ACGGGTGCCG ACTCCATCCG TGACGTGATC GCCTTCCCCA AGACCCAGCG CGCCCAGGAC CTGCTGACGC AGGCACCTTC GCCCGTGGAC GAAAAGCAGC TGCGCGAGCT GCACATCCGC CTGCGCAACC CGCTGGCGGC CACCCAGGGC TGA
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Protein sequence | MAMRSHYCGL VTEALMGETV TLCGWVNRRR DHGGVIFIDL RDREGYVQVV CDPDRAEMFK TAEGLRNEFC VQVKGLVRAR PEGTTNDKLK SGQIEVLCHE LNVLNASVTP PFQLDDENLS ETVRLTNRVL DLRRPYMQRN MMLRYRTAIQ VRNFLDKEGF IDIETPMLGK STPEGARDYL VPSRVHDGEF FALPQSPQLY KQMLMVAGYD RYYQITKCFR DEDLRADRQP EFTQIDCETS FLDEEEIRAI FQRMITEVFK TQLDVDLGEF PMMTYQDAAF RFGSDKPDLR VKLEFTELTE IMKDVDFKVF STPATTKGGR VVALRVPGGS QISRGEIDQY TEFVKIYGAK GLAWIKVNEV AKGRDGLQSP IVKNLHDAAI AEILKRTGAQ DGDLIFFGAD KEKIVNDSIG ALRLKVGHSE FGKANGLFEN RWAPLWVVDF PMFEHDEEND RWAAVHHPFT SPKDGHEELM VTDPANCLAK AYDMVLNGWE LGGGSVRIHR ADVQSKVFDA LKISPEDARA KFGYLLDALQ YGAPPHGGLA FGLDRLITLM TGADSIRDVI AFPKTQRAQD LLTQAPSPVD EKQLRELHIR LRNPLAATQG
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