| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3682 |
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| Symbol | |
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| ID | 5749265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4045257 |
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| End bp | 4047062 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641298781 |
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| Product | NERD domain-containing protein |
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| Protein accession | YP_001564699 |
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| Protein GI | 160899117 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3972] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.023391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.021571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTAC TGATTCCTGC GATGGGGGCG TGCGTTGGGC GCATGACGCC CGGCGAGCGA
CGGCTGGCCG AGCGTTTGGA GCAAAAGCTC GAAGACGATT ACATGCTCTG GTATGACGTA
CCCATCGGTC CCAAGCAGAC GCATCCTGAC TTCGTCGTCA TTCATCCACG CAGGGGCGTT
CTGATTCTTG AGACCAAGGA TTGGCGGCTC GAGACGGTTC AAGAGGCGAC CAAACAGGCC
TGGACGCTCA TCGTGGATGA AAGGCCCAAG GTCGTCATCA ATCCGGCAGC TCAGGCGCGA
CACTGCGCCA TTCAAGTGGT CAATGCACTG GAGCGGGATC AGCAACTCAT TCACGACGAA
GGCCCTCATC AGGGAAAGCT GGCATTTCCC TGGGGCAGCG GCGTGGTGTT CACCAACATC
ACGCGCAAGC AGTTTGAAGA GTCTGCACTG GACCAGACGA TTGATGCGCA CCTTGTCATC
TGCAAGGACG AGATGCTGGA ATCCGTTGAT GCAGAGGCTT TCCAGCAGCG CCTGTGGAAC
ATGTTCCCCC ACGCTTTCGG CAAAGCCATG TCGGTGCCGC AGCTCGAGCG CACGCGGTGG
ATCATGTTCC CGCAGGTGCG TGTTCCGGTG CAAGGCAGCC TTCTGCCGGA AGACGCGGAC
GAGCTGCCGG ACATCATGCG CGTCATGGAC TTGCAGCAGG AGCAACTCGC GCGCAGCCTG
GGCGATGGGC ATCGCGTGAT CCACGGAGTT GCCGGCTCAG GCAAGACCAT GATTCTTGGC
TATCGTGCGG AACACTTGGC CAAGACCGCT TCGACCAAGC CCATCCTCGT GCTCTGCTAC
AACGAGCCCT TGGCAGTGAA GCTCAATGCC TGGTTTGCGG CCAAGGGCCT GGCCGATCGG
GTGCACGCCC GCAACTTCCA CAAGTGGTGT CGCCAGCAGT TGGTGGCCTA TGGTCAGACG
CTACCCGCTC AGGGCCCGGG CATGTTTGAT CAGATGGTGG AGTTTGTAAT TCGCGGCGTG
GACCGGCAAC AGATTCCGTC CGGGCAGTAC CAGGCCGTGA TGGTCGACGA GGGGCACGAC
TTTCAGCCTG AATGGCTCAA GCTCGTCACC CAGATGGTGG ACCCCGAGAC CAACAGCCTG
TTGATCCTGT ACGACAGCGC CCAGAACATC TATGGCAAGA GCAAGGCGCG TGGGTTCAGC
TTCAAGAGCG TGGGAATCCA GGCCTCTGGG CGCACAACCA TTCTCAAGAT CAACTACCGC
AACACCAGGC AGATTCTGCA AATCGCCAAC CGCGTCGCCG CCGAGTTCCT GCAACCCAAT
GCCCAGGATG ATGACGGTGT TCCGCTGGTG CAACCCATCA GCTGCGGCCG CGAAGGGCAG
GAGCCGCTGA TCGTGCGCCT GCCGAGCTTG CGGGACGAGC CCGCCAAGAT CGCCGAGCTG
CTGGCTGCTG CGCATCAGGA AGGCCACGCC TGGGGTGACA TGGCCATCCT GTGCCGCGAT
CACGACTCCA TGAACCAGTG CGCCCTGGCA CTTGGCCGCC GAAAACTGCC GCATCGCGTG
CGACATCGGT CAGGTGACTT CGATCCACTG GCCGACACCA TCAAAGTGAT GACAATGCAC
GCCAGCAAGG GGTTGGAGTT CCCGGTCGTG GCCGTCGCAG GAGTGGGGCA GATGCCGCGT
GAAGGCGAAG ATGCGGCGGA CGAGGCCAAA CTGTTCTATG TGGCTGCGAC TCGGGCGACA
CAAAAACTGG TGTTGACTGT GGCGGGAGAA GGGGCGTTTG CGAAGGCGCT GGTGGATGCG
GGGTGA
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| Protein sequence | MAVLIPAMGA CVGRMTPGER RLAERLEQKL EDDYMLWYDV PIGPKQTHPD FVVIHPRRGV
LILETKDWRL ETVQEATKQA WTLIVDERPK VVINPAAQAR HCAIQVVNAL ERDQQLIHDE
GPHQGKLAFP WGSGVVFTNI TRKQFEESAL DQTIDAHLVI CKDEMLESVD AEAFQQRLWN
MFPHAFGKAM SVPQLERTRW IMFPQVRVPV QGSLLPEDAD ELPDIMRVMD LQQEQLARSL
GDGHRVIHGV AGSGKTMILG YRAEHLAKTA STKPILVLCY NEPLAVKLNA WFAAKGLADR
VHARNFHKWC RQQLVAYGQT LPAQGPGMFD QMVEFVIRGV DRQQIPSGQY QAVMVDEGHD
FQPEWLKLVT QMVDPETNSL LILYDSAQNI YGKSKARGFS FKSVGIQASG RTTILKINYR
NTRQILQIAN RVAAEFLQPN AQDDDGVPLV QPISCGREGQ EPLIVRLPSL RDEPAKIAEL
LAAAHQEGHA WGDMAILCRD HDSMNQCALA LGRRKLPHRV RHRSGDFDPL ADTIKVMTMH
ASKGLEFPVV AVAGVGQMPR EGEDAADEAK LFYVAATRAT QKLVLTVAGE GAFAKALVDA
G
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