Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1042 |
Symbol | secY |
ID | 5746596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1154423 |
End bp | 1155742 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641296122 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_001562073 |
Protein GI | 160896491 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTACTA GCGCAGCTCA AATTGCAAAA ACCGGAAAAT TCGGCGATCT TCGCCGCCGT CTGGTTTTTC TGTTGCTCGC GCTGGTCGTT TACCGGATCG GGGCTCATAT CCCCGTGCCG GGCATCGATC CAGCGCAGCT GCAGCAGCTG TTCAATGGCC AGCAGGGCGG CATTCTCAAT CTGTTCAACA TGTTCTCGGG TGGGGCGCTC TCGCGCTTCA CGGTGTTCGC ACTGGGGATC ATGCCGTACA TCTCGGCATC GATCATCATG CAGCTCATGA CCTACGTGGT CCCTACATTC GAGCAGCTGA AAAAGGAAGG TGAATCGGGT CGTCGCAAGA TCACCCAGTA CACCCGCTAC GGCACATTGG GCCTGGCGAT TTTTCAGTCC CTGGGAATTG CCGTGGCTCT GGAAAGCTCC GCAGGTCTGG TTCTGAGCCC TGGCTTCGGC TTCCGCCTCA CGGCGGTGGT CAGCCTGACG GCCGGCACCA TGTTCCTGAT GTGGCTCGGT GAACAGATCA CGGAACGTGG TCTGGGCAAC GGCATCTCGA TCCTCATCTT TGGAGGTATC GCCGCAGGTC TGCCGAGCTC CATCGGTGGT CTGCTGGAGC TGGTGCGCAC CGGTGCCATG AGCATCCTGG CCGCGATCTT CATCGTTCTC GTGGTGGCAG CCGTGACGTA CTTCGTCGTG TTTGTCGAGC GGGGACAACG CAAGATCCTG GTGAACTATG CGCGTCGTCA GGTGGGTAAC AAGGTGTATG GTGGCCAGTC TTCGCACTTG CCGCTGAAGC TGAACATGGC GGGGGTCATT CCTCCCATCT TCGCTTCCTC GATCATCTTG CTGCCGGCGA CCGTTGTGAA CTGGTTCAGT GCAGGGGAAT CTATGCGCTG GCTGAAGGAC ATTGCTAGCA CGCTGACCCC CGGTCAGCCG ATCTATGTGA TGCTCTACGC CACTGCCATC ATCTTCTTCT GCTTCTTCTA CACGGCCCTG GTGTTCAACA GCCGGGAAAC CGCCGACAAC CTGAAGAAGA GTGGTGCCTT CATCCCCGGG ATCCGTCCCG GTGACCAGAC GGCCCGCTAC ATTGACAAGA TCCTGGTTCG CCTGACCCTG GCTGGCGCGG TGTACATCAC ATTCGTGTGC TTGTTGCCCG AGTTCCTGAT CCTGAAGTAC AACGTTCCGT TCTACTTCGG TGGCACATCA CTGCTGATTA TTGTGGTGGT GACCATGGAC TTCATGGCCC AGGTGCAGAA CTACATGATG TCGCAACAGT ACGAATCGCT CCTCAAAAAG GCGAACTTCA AAGCGACACT TGGCAATTGA
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Protein sequence | MATSAAQIAK TGKFGDLRRR LVFLLLALVV YRIGAHIPVP GIDPAQLQQL FNGQQGGILN LFNMFSGGAL SRFTVFALGI MPYISASIIM QLMTYVVPTF EQLKKEGESG RRKITQYTRY GTLGLAIFQS LGIAVALESS AGLVLSPGFG FRLTAVVSLT AGTMFLMWLG EQITERGLGN GISILIFGGI AAGLPSSIGG LLELVRTGAM SILAAIFIVL VVAAVTYFVV FVERGQRKIL VNYARRQVGN KVYGGQSSHL PLKLNMAGVI PPIFASSIIL LPATVVNWFS AGESMRWLKD IASTLTPGQP IYVMLYATAI IFFCFFYTAL VFNSRETADN LKKSGAFIPG IRPGDQTARY IDKILVRLTL AGAVYITFVC LLPEFLILKY NVPFYFGGTS LLIIVVVTMD FMAQVQNYMM SQQYESLLKK ANFKATLGN
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