Gene Daci_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0350 
Symbol 
ID5745887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp390405 
End bp391415 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content69% 
IMG OID641295413 
Producthypothetical protein 
Protein accessionYP_001561381 
Protein GI160895799 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGC TAAACTGGCC CGCAGGAGAC AACAACACCA TGAAGCAGAT CATTCTGGCC 
GCCGCAGCCT GCGCGGCCGC CGCCTTGGCC ATGCCGGCCA GCGCCGCCTA TCCCGACAAG
CCCATCCGCC TGATCGTGCC CTTCCCGCCC GGGCAGGCCA CGGACATCTT TGCGCGCGCG
CTGGCTGAAA AGCTCGCCCA GAAGCTGGGC CAGCCGCTGG TGGTGGAGAA CAAGGCCGGG
GCCGGCAGCA ACATCGGCAG CGAGCAGGTG GTGCGCAGCC CGGCCGACGG CTACACGCTG
CTCGTGGCCG GCAGTGCCAT GGCCGTGAAC CAGACGCTGT ACAAGAAGGT GAATTTCGAC
CCGCGCACCG ACCTGTTGGG CATCACGCTG ATCGCCAAGG TGCCGCTGGT GTTCCTGGCG
CACCCGGGTG CGGGCATCCA ATCCATGAAA GATCTGGTGG ACAAGGCGCG TGCCGAGCCG
GGCCGCTGGA ACTACGCCAG CGCCGGCATC GGCGGCACCC AGCACCTGAG CGCCGAGATG
GTCAAGGCGC GCGCCAAGAT ACAGATAGAG CACATCCCCT ACAAGGGCAG CGGCCCCGCG
CAGGCGGACT TCGTGGGCGG CCAGGTGCCG CTGATGGTGG ATTCGGTGAC GGCCGCCCTG
CCCAATATCC AGGCGGGCAA GGCCGTGCCG CTGGGCGTGA CCTCCAGCGC CCGCTCCAGC
CAGCTGCCCG AGGTGCCGGC CATTGCCGAA TCGGGCCTGC CCGAGTTCCG GGGCTTCGAG
GCCGTGGGCT GGCTGGGCCT GATGGCGCCC AAGGGCACGC CGCAGGAAGT GATAGACCGG
CTCAACCGAG AGGCCGTGGC CATCCTGCGC AGCCCCGAGA TGCGCAAGTT CATCAGCGAC
CGGGGCTCGG AAGCCGCACC CACCACACCC CGCGAGATGG ATGCCTTCGT GGCCTCCGAG
ATCACGCAGT GGGGCCAGGC CGTGCGGCAG TCGGGCGCCT CGGTGGATTG A
 
Protein sequence
MPPLNWPAGD NNTMKQIILA AAACAAAALA MPASAAYPDK PIRLIVPFPP GQATDIFARA 
LAEKLAQKLG QPLVVENKAG AGSNIGSEQV VRSPADGYTL LVAGSAMAVN QTLYKKVNFD
PRTDLLGITL IAKVPLVFLA HPGAGIQSMK DLVDKARAEP GRWNYASAGI GGTQHLSAEM
VKARAKIQIE HIPYKGSGPA QADFVGGQVP LMVDSVTAAL PNIQAGKAVP LGVTSSARSS
QLPEVPAIAE SGLPEFRGFE AVGWLGLMAP KGTPQEVIDR LNREAVAILR SPEMRKFISD
RGSEAAPTTP REMDAFVASE ITQWGQAVRQ SGASVD