Gene Daci_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0118 
Symbol 
ID5745654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp127377 
End bp128489 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content72% 
IMG OID641295180 
ProductFAD-binding 9 siderophore-interacting domain-containing protein 
Protein accessionYP_001561149 
Protein GI160895567 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC TGCAGGCACG CACTTCGGTG CGCATGGACA GGGCCGAGGA GGCCATCGCC 
GCCATCGTCG GGCACATGCA GGAGCACGAC ATCACCGTGC GCCGCGAAGG CTCGCGCTGG
GTGGCCGACT ACGAAGGCGG CCAGGGCCAG CTGTGGCTGG AGGGCCGGCA GGTCCATGCC
GAGGTGGCGG CGCCCGGCGT GGAGCTGCTG CAGGACATGA AGCTCATGCT GGCCCACCTG
CTGCTGGAGG CCACGGGCGC CGCCGACGGC TCCCTGGCCT GGGAGGGTGA CGGCGCCGCG
CTGCAGCGCC CGCCGGCCTT CCGCGAGCTG CGGGTGCTGG CCGTGCGCGA TCTCACGCCG
CACATGCGCC GCGTGCGCTT TGCCTGTGAC GACATGGCGC GCTATGCGCA GGACACCAAC
ATCCACGTCA AGCTGCTGTT CCCCCAGCCG GGCGTGGCCG AGCCCGAATG GCCCACGCTG
TCGGCCAGCG GCCTGCTGCG CCTGCCCGAG GGTGACATGC GCCTGGACAT GCGCACGTAC
ACCATGCGTG CGATGGGAAT GGCCCAAGAC GGCGCCAACG GATGGATGGA CGTGGACTTC
GTGCTGCACG AGGACGCCGG CCCCGGGTCC GCCTGGGCCG CGCGCGCCCA GCCGGGCCAG
CGCATCGGCA TGACCGGCCC CGGCGGGCGC ACGGCCACCC CGGCCGACTG GATGCTGCTG
GCTGGCGACG ACACCGGCCT GCCGGCCATG CTGCGCATTG CGGCCGCCCT GCCGGCGCAC
ACGCGCGGCC ATGTGTTTGC CGAAGTCCAG GGCCCGCAGG ACGAGCAGCC CGTGCAGGCG
CCCGAAGGCC TGCAATGGCA CTGGCTGCAC CGTGGCGCTG CCGAGGCCGG CACCACCACG
CTGCTGATCG ACGCGCTGCG CGCCGTGCGC TGGCCGGATG CGTTGGCCGG TCATCCCCCC
AGCCGCTTCG TCTGGGCCGC TGGCGAATTC GACACCGCCC AGGCCGTGCG CCAGTGGGCG
CGCGAGGAGC GCGGTCTGGA AAAGCACGAG CAGCTGATCG TGGCCTACTG GCGGCGCGGC
ATGAGCGAGT CGGATTTCAA GGCCGCGAAG TAG
 
Protein sequence
MTQLQARTSV RMDRAEEAIA AIVGHMQEHD ITVRREGSRW VADYEGGQGQ LWLEGRQVHA 
EVAAPGVELL QDMKLMLAHL LLEATGAADG SLAWEGDGAA LQRPPAFREL RVLAVRDLTP
HMRRVRFACD DMARYAQDTN IHVKLLFPQP GVAEPEWPTL SASGLLRLPE GDMRLDMRTY
TMRAMGMAQD GANGWMDVDF VLHEDAGPGS AWAARAQPGQ RIGMTGPGGR TATPADWMLL
AGDDTGLPAM LRIAAALPAH TRGHVFAEVQ GPQDEQPVQA PEGLQWHWLH RGAAEAGTTT
LLIDALRAVR WPDALAGHPP SRFVWAAGEF DTAQAVRQWA REERGLEKHE QLIVAYWRRG
MSESDFKAAK