Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1421 |
Symbol | |
ID | 3229258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1291274 |
End bp | 1292686 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637120981 |
Product | PP-loop family protein |
Protein accession | YP_182129 |
Protein GI | 57233795 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGCGAAC GGGTAAGCAG ATATATAAAA CAACAGGGCA TGGTGTCAGA CGGAGATGAA ATCCTGCTGG CGGTTTCTGG CGGGCCTGAT TCCGTTTGTA TGCTTTACAT AATGCATAAA CTAAGCTGTG AAATGGGTTT CAGTTTGCGG CTGGCCCATT TGAACCACAG CCTGAGGGGT GAAGAATCCG AGCGTGATGC CGCCTATGTG GCCGAACTGG CGGCTGCTTT GGGTGTACCC CTTTGCCAGC AGAAAGTCAG TGTCAAGGCC TATCAGGCTG AACACCACCT GTCAACTGAA GAAGCCGCCC GCGAAATGCG GTATGCCTTT CTTTGCCGGA CTGCTGCTGA GTATGGTTCG GCGGCAGTGG CGGTGGGACA CACCACAGAT GACAATATTG AAACGGTTAT GCTTCATCTG GTACGCGGCA GCGGAACCCG CGGGCTTCAG GGACTTAGGC CTGTTTTAAA CCGTACGGTA GCCGGTGAAG GCTGTCTAAG GGTTATCCGC CCTCTGCTTG GCCTCAGCCG GGCTGAAACT CAAAATTACT GCTGCGAAGC CGGGCTTTCA CCCGTACAGG ACGTAACTAA CCAGAGTACA GACCTTTTAC GCAACCGTAT CCGCCTTGAG GTGCTGCCCA TGCTTAGGGG AATTAACCCC GCCTTTGAAG AAACCATACT CCGCACTGCA TTTATTGCGG GTGAAGAAAT GGCCCTGCTG GACGAAGTGA CTTCTCAAAT GAAGGCTGAG CTGGTAATCC GGCAGGACAA TGTGCTTATG ATTGAAAAAA TAGAGATGCA GCGGCTTCAT CCGGCACTCA AAAGAAACCT GCTTAGGCAG ATGCTGGAAG AACTGCTGGG CGGACTGAAG GATATTGAAG CCCGTCATAT AGAAAGCATT ATCCAGACTC TGGACAAACC TGCCGGACGG CGAATAGACC TGCCTTACAA GCTGGTCTTT CAGGTGGACT ATGAACATTA TTTGCTGGGC TGGGAGATTG ATGAACTCTG TCCGTACCCG CCTTTTCAGG GGGAGTACCG GCTGGGAGTT GGCACTGAAA CTATTTTGGA CGGCTGGACT GTAAAGACCG AAGTCTTGCC TTCCCCGGTA GGGCTGGATT TAAGTGAAAG TACTCTGGTG GCCTATCTGG ATATGGACAA AGCCGGGAGT GACCTGGCTG TCCGCACCCG CACCGAAGGT GACCAGTTTC AGCCGCTGGG CATGGAAGAA GCCAAAAGCC TGAAGGAATT TATGATAGAT AATAAAATCC CCCGAAGCTG GCGGGCCAGA GTACCCCTGC TTTTTTCGGG CGCAGAAATA CTCTGGCTGG TGGGCTACCG TATCGGCCAG TCTGCCAAGG TAGATGAAAA TACCCGCCGG GTGCTTCGGG TGGAATTTAA ACTCCAAAAT TAA
|
Protein sequence | MSERVSRYIK QQGMVSDGDE ILLAVSGGPD SVCMLYIMHK LSCEMGFSLR LAHLNHSLRG EESERDAAYV AELAAALGVP LCQQKVSVKA YQAEHHLSTE EAAREMRYAF LCRTAAEYGS AAVAVGHTTD DNIETVMLHL VRGSGTRGLQ GLRPVLNRTV AGEGCLRVIR PLLGLSRAET QNYCCEAGLS PVQDVTNQST DLLRNRIRLE VLPMLRGINP AFEETILRTA FIAGEEMALL DEVTSQMKAE LVIRQDNVLM IEKIEMQRLH PALKRNLLRQ MLEELLGGLK DIEARHIESI IQTLDKPAGR RIDLPYKLVF QVDYEHYLLG WEIDELCPYP PFQGEYRLGV GTETILDGWT VKTEVLPSPV GLDLSESTLV AYLDMDKAGS DLAVRTRTEG DQFQPLGMEE AKSLKEFMID NKIPRSWRAR VPLLFSGAEI LWLVGYRIGQ SAKVDENTRR VLRVEFKLQN
|
| |