Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1087 |
Symbol | |
ID | 3229624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 988488 |
End bp | 989822 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637120651 |
Product | HK97 family portal protein , putative |
Protein accession | YP_181802 |
Protein GI | 57234157 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATAT TTTCAGGATT ATTTCGGAGC CGGGATAAGC CCAAGGACGC GACCAGCGGA AGCTCCTACC GCTTCTTCTT CGGCGGCACG ACCTCCGGCA AAGCTGTAAC GGAACGCTCC GCCATGCAGA TGACGGCGGT CTACTCCTGC GTTCGGATTC TATCCGAGGC GATTGCTGGC CTGCCCGTTC ACCTGTACCG GTACGACGGC AGCGGCGGCA AGGAAAAAGC GACCACTCAT CCGCTCTACT TCCTATTGCA TGATGAGCCA AACCCGGAAA TGACATCCTT TGTCTTTCGG GAAACGCTGA TGACGCACCT TTTGCTGTGG GGAAACGCCT ACGCGCAGAT CATCCGAAAT GGCAAGGGCG AGGTCGTGGC TCTCTATCCG CTTATGCCAA ACCGCATGAC GGTTGACCGC GACGCAGACG GTCACCTCTA CTACGAATAT CAGACCTCGC AGGATGAGGC GCACACGATG GATGGCAGCC GCGTCAGGCT CTCTCCAAGC GATGTGCTCC ATATTCCCGG CCTTGGCTTT GACGGCCTGA TGGGCTACAG CCCGATTGCG ATGGCAAAGA ACGCTATCGG CATGGCGATT GCCTGTGAGG AATACGGAGC TAAGTTCTTC GCTAACGGCG CGACGCCCGG CGGCATCTTG GAGCATCCCG GTGTGATAAA AGACCCGGAG CGTGTCAGGG AAAGCTGGAA CTCAGCCTTC GGCGGCAGCG CCAATGCAAA CAAGGTGGCG GTTCTTGAGG AGGGCATGAA ATACACGCCC ATCTCCATTT CACCGGAGCA GGCGCAGTTC TTGGAGACGC GGAAGTTCCA GATCAATGAG ATCGCTCGTA TCTTCCGCAT CCCGCCTCAT ATGATCGGCG ACCTTGAGAA ATCGAGCTTT TCCAACATCG AGCAGCAGTC GCTGGAGTTC GTGAAATACA CGCTCGACCC GTGGGTCTGC CGCTGGGAAC AGTCCATGCA GCGGGCGCTT TTGTCTATGG ACGAGAAGAA GGAATACTTC TTCAAGTTCA ATGTGGACGG CCTGCTTCGC GGAGATTACC AGAGCCGCAT GAACGGCTAT GCGACCGGAC GCCAGAACGG CTGGATGAGC GCTAACGATA TCAGGGAGCT GGAAAATCTC GACCGTATCC CGGAGGAGGA AGGCGGCGAC CTGTATCTTA TAAACGGCAA CATGACCAAG CTCAAGGACG CAGGCATTTT TGCAGCCTCG TCTCAGGGAC AGGAGGAGCC AGATGAAACA GAAGAATCAA AACAAGAGCC GGAACAGCCA CAGCAAAGTG AGCGCACCCG GCCACGAAAG AAGGAGGCAC TATGA
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Protein sequence | MSIFSGLFRS RDKPKDATSG SSYRFFFGGT TSGKAVTERS AMQMTAVYSC VRILSEAIAG LPVHLYRYDG SGGKEKATTH PLYFLLHDEP NPEMTSFVFR ETLMTHLLLW GNAYAQIIRN GKGEVVALYP LMPNRMTVDR DADGHLYYEY QTSQDEAHTM DGSRVRLSPS DVLHIPGLGF DGLMGYSPIA MAKNAIGMAI ACEEYGAKFF ANGATPGGIL EHPGVIKDPE RVRESWNSAF GGSANANKVA VLEEGMKYTP ISISPEQAQF LETRKFQINE IARIFRIPPH MIGDLEKSSF SNIEQQSLEF VKYTLDPWVC RWEQSMQRAL LSMDEKKEYF FKFNVDGLLR GDYQSRMNGY ATGRQNGWMS ANDIRELENL DRIPEEEGGD LYLINGNMTK LKDAGIFAAS SQGQEEPDET EESKQEPEQP QQSERTRPRK KEAL
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