Gene DET0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0464 
SymbolaroK 
ID3230171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp437684 
End bp438214 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID637120030 
Productshikimate kinase 
Protein accessionYP_181208 
Protein GI57234702 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AAAATAATAT TGCCCTGATA GGCTTTATGG GTGCCGGCAA AAGCAGCGTA 
TCCAAACTGC TTTCTGAAAG GCTGGGTAAA ACGCTGGTCA GTACTGATGC CTGCATAGAA 
ACACGCGAAG GCTTAAGCAT AATCAGCATA TTCAAAGAAA AAGGCGAAGA CTATTTCCGC 
CAGATGGAAA GCCGGGTACT GGAAGACCTC TGCCGGCAAT CAGGCCAGAT TATAGACTGC 
GGCGGCGGTA TAGTAATGCG CCCCCCTAAT CTCAGCCTTA TGCGTCTAAA CTGTCTGGTA 
ATCTATCTGG AAAGCCGGCC TGAAGATTTG GAGGCCAGGC TGAAAAACCA TACCAACCGC 
CCTTTGTACA ATGCCGAACG ATTGGATAAA ATGTTAAAAT TGCTGGAAAG CCGGTTGCCT 
TTATACCGGG CGGCAGCTAA TATTACTATT TCCACCCATA ACAAATCATG CCATGAAGTC 
TGCGAAGAAA TAGAAGACAA ACTGAGGGAA TATGAAAATA CGTCTGGATA A
 
Protein sequence
MKIKNNIALI GFMGAGKSSV SKLLSERLGK TLVSTDACIE TREGLSIISI FKEKGEDYFR 
QMESRVLEDL CRQSGQIIDC GGGIVMRPPN LSLMRLNCLV IYLESRPEDL EARLKNHTNR 
PLYNAERLDK MLKLLESRLP LYRAAANITI STHNKSCHEV CEEIEDKLRE YENTSG