Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_2354 |
Symbol | |
ID | 8391674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 2364708 |
End bp | 2366252 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644980322 |
Product | DNA repair protein RadA |
Protein accession | YP_003138064 |
Protein GI | 257060176 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.561638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAAT CTCGAACAAT CTACATTTGT AGTACCTGTG GCGCAGAGTC CCCTCAATGG TTTGGCAAAT GTCCTAGTTG TGGGGTCTAT GGGACCTTAG AAGAACAAGT GGTTAATACC AGTCCACCTG GGGCAATCTC ACGGGGAGGA TGGCAAACAG GCAGCCGTTC TGAGGGGGTT TCGAGTGCTC CTCCTAAACC TCGGATCTCG ATTCCTTTTT CGGAGATCAC CCAAACTGAA CAAGAACGAT TTCCCTCGGG TTATGGAGAA TTAGATCGGG TTCTCGGTGG GGGGGTTGTG CCGGGTTCTC TAGTGTTAAT CGGCGGTGAT CCGGGGATTG GGAAATCGAC CTTGTTACTA CAAACGGCTA ATCAGCTTTC TCAGCGACTC CCCCGCATTC TTTATGTGTC TGCCGAAGAA TCGGGACAAC AGGTTAAATT ACGGGCTTCG CGTTTAGGGG TAACAGAATT AACTCCTACT ACTGATTCTA ACAGTAATGG GAACCCAAAA AAAGAAACTG AATCGGAAGA ATTGAAGTTA ACAGAACCCT ATGCTAATCT TTATATTTTA CCAGAGACAG ACTTAGAAGA AATTCTGCGG GAATTGGAAT CTTTAAAGCC TCAAGTTGCC GTTATTGATA GTATTCAAAC ACTTTATTTT GCTGCTTTAA CCTCAGCCCC TGGTTCAGTG GCGCAAGTGA GGGAATGTAC GTCGGCTTTA ATGCAGGTGG CTAAACGGGA AAATATTACT TTATTAATTG TGGGTCATGT GACTAAAGAA GGGGCGATCG CAGGTCCGAG AGTGTTGGAA CATTTAGTCG ATACGGTACT ATATTTTGAG GGCGATCGCT ATGCTTCCCA TCGTCTTTTG CGATCGGTTA AAAATCGCTT TGGGGCAACC CATGAAATCG GGATTTTTGA AATGGCTGAA CATGGGTTAG TTGAAGTTGC TAACCCCTCG GAATTATTCT TAGGAAACCG CGATGAATTT GCCCCTGGAA CAGCGACGGT GGTTGCTTGT GAGGGAACTC GTCCTTTAGT GGTAGAATTG CAAGCCTTAG TCAGTCCGAC TAGCTATTCT TCTCCTCGTC GTTCGACCAC GGGAGTTGAT TATAGTCGTC TGCAACAAAT TCTGGCAGTT TTGGAGAAAC GGGTGGGCAT TCCTTTGTCA AAATTAGATG CCTATGTTGC TTCGGCCGGA GGGTTAGGGG TAGAGGAACC GGCCGCTGAT TTAGGAATAG CGATTGCTGT TGTGGCCAGT TTCCGCGATC GCGTGGTTGA CCCCCGAACC GTATTAATTG GTGAGGTGGG TTTGGGGGGT CAAGTTCGGT TGGTTTCTCA GATGGAATTG CGTCTCAAAG AAGCAGCAAA GTTAGGATTT AAACGGGCAA TTGTTCCCAA GGGACAAAGT TTACCGGATG ATTTGGGATT AGAAATTATT ACGGTTAATA AGGTGATTGA TGCCATTATT GCTGCCATTC CTCCTCAACA TAAATTTGGT GCCGAAAGTT CAGAAATAGG TGAAGAAGAA GGAGGTGATT TTTAA
|
Protein sequence | MAKSRTIYIC STCGAESPQW FGKCPSCGVY GTLEEQVVNT SPPGAISRGG WQTGSRSEGV SSAPPKPRIS IPFSEITQTE QERFPSGYGE LDRVLGGGVV PGSLVLIGGD PGIGKSTLLL QTANQLSQRL PRILYVSAEE SGQQVKLRAS RLGVTELTPT TDSNSNGNPK KETESEELKL TEPYANLYIL PETDLEEILR ELESLKPQVA VIDSIQTLYF AALTSAPGSV AQVRECTSAL MQVAKRENIT LLIVGHVTKE GAIAGPRVLE HLVDTVLYFE GDRYASHRLL RSVKNRFGAT HEIGIFEMAE HGLVEVANPS ELFLGNRDEF APGTATVVAC EGTRPLVVEL QALVSPTSYS SPRRSTTGVD YSRLQQILAV LEKRVGIPLS KLDAYVASAG GLGVEEPAAD LGIAIAVVAS FRDRVVDPRT VLIGEVGLGG QVRLVSQMEL RLKEAAKLGF KRAIVPKGQS LPDDLGLEII TVNKVIDAII AAIPPQHKFG AESSEIGEEE GGDF
|
| |