Gene Cthe_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3110 
Symbol 
ID4809741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3670953 
End bp3671717 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID640108543 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_001039498 
Protein GI125975588 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATC AATTTTCAAG AACAGAAATA TTATTTGGAA AAGAGGCAAT GAAAAAGCTG 
GAGCTGGCAA CGGTTGCAGT CTTTGGTATA GGCGGAGTTG GAGGCTATAC GGTGGAGGCT
CTTGTCAGAA GCGGAGTGGG CAATTTTGTG CTTGTGGATG ATGATAAGGT ATGCCTTACC
AATTTAAACC GACAGATCAT TGCCACGAGA AAAACAATAG GACAGTATAA AGTAGATGTT
ATGAAAGAAA GAATTTTGGA TATAAATCCG AAAGCAAATG TTACTGTACA TCGGTGCTTT
TTCCTTCCGG AGAACTCCGA CCAATTTGAT TTTGCATCCT ACAGCTATAT TGTAGATGCC
ATTGATACGG TGACGGCAAA GATTGAACTG GTTATGAAAG CCAAGGAATT CGGAGTGCCG
ATTATCAGTG CCATGGGTGC CGGCAACAAG ATTGACCCCA CCCAGCTCAA GGTTGCGGAC
ATATACAAGA CATCCGTTTG CCCGCTTGCA AGGGTCATGA GATATGAACT CAGAAAGCGG
GGAATAAAGA ATTTAAAAGT GGTTTATTCA ACAGAAGAAC CCAGAAAGCC TGTTGAAGAT
ATAGCCATCA GTTGCAGAAC AAATTGTGTA TGCCCGCCCG GGACGGAAAG AAAATGTACG
GACAGAAGAA ACATACCGGG AAGCACGTCC TTTGTTCCAT CAGTTGCAGG TCTTATAATT
GCCGGTGAAG TTATCAAAGA TATAATAGGA GACATAAATG GATAA
 
Protein sequence
MLNQFSRTEI LFGKEAMKKL ELATVAVFGI GGVGGYTVEA LVRSGVGNFV LVDDDKVCLT 
NLNRQIIATR KTIGQYKVDV MKERILDINP KANVTVHRCF FLPENSDQFD FASYSYIVDA
IDTVTAKIEL VMKAKEFGVP IISAMGAGNK IDPTQLKVAD IYKTSVCPLA RVMRYELRKR
GIKNLKVVYS TEEPRKPVED IAISCRTNCV CPPGTERKCT DRRNIPGSTS FVPSVAGLII
AGEVIKDIIG DING