| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2387 |
|---|
| Symbol | |
|---|
| ID | 4811039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2853597 |
|---|
| End bp | 2854868 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640107800 |
|---|
| Product | gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I. metallo peptidase. MEROPS family M14C |
|---|
| Protein accession | YP_001038782 |
|---|
| Protein GI | 125974872 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGTAC TAAGACTTGG CTCCGTCGGA CCTGATGTAA AACTGGCTCA AAGCCTGCTT
AATAAAATTG GCTATCCGGT CGGGGCTGTG GACGGAATAT ACGGAACACG AACCCGGCAG
GCGGTAATTG CTTTTCAGAG AAACAACGGA CTTGTGGCCG ACGGAATTGT GGGACCGGCA
ACGTGGAGCG TCTTTGAACA ATTTCTGAGA GGATACGCAA TTTACTATGT CAGACCCGGA
GATACTTTAT ATAATATTGC CGGAAGGTTT TATACATCGG TCAACTCCAT AGTAACAGCC
AATCCGGGAA TAAACCCCAA TGTCATAAAT ATAGGGCAAA GGTTGGTGGT TCCCTACGGA
ATAGATGTGG TATTTACCGA CATTGACTAT ACTTATGAAA TAATGGAAAG GGATATCCAG
GGTCTTAAAG CAAGATATCC GTTCCTGGAG ACAGGAGTCG CGGGCACCAG TGTCCTTGGA
CGAAATCTTT ATTATCTGAG ACTCGGAACC GGTCCAAGAC AGGTATTTTA CAATGCCGCC
CATCATGCCA TTGAATGGAT AACCACCGTG CTTCTTATGA AATTTGCGGA AAACTTCCTG
AAAGCATATT CCACCGGCAG CAGGATTCGT GGTTATAATG TAAGGGAAAT ATGGAATCAA
AGCAGTATAT ACATTGTACC CATGGTAAAT CCGGACGGAG TGGATCTTGT CCTTAACGGA
CTTAGCCCGA CAAACCCGTA TTATGCGGAC CTGCTGCGCT GGAATACCAC AGGCAGACCG
TTTTCCCAGG TGTGGAGTGC CAATATCAGG GGAGTTGATT TAAACAGAAA TTATCCGGCA
AGTTGGGAAG AAGCAAAAGC GCAGGAAGAA GCATTGGGTA TATTCGGTCC TGGCCCCACA
AGATACGGAG GACCGTATCC TCTTTCAGAG CCCGAGTCAT CCGCCATGGT GAGCTTTACA
AGAACTCATG ATTTCAGGCT TGCCCTGGCA TACCATTCGC AGGGAAGAGT AATATACTGG
AACTATTTAA ATCTTGCTCC ACCTGAGTCC CTGACAATTG CAAATGCTTT TGCAAGGGTA
AGCGGATACA TTGTTTTGGA TGTCCCTTAC GAGGCTGCCT ATGCCGGATA CAAGGATTGG
TTTATACAGG AGTACAGAAG ACCCGGATTC ACTATTGAAG TGGGATTGGG GCAAAATCCT
CTTCCCATAT CCCAATTTAA TACTATTTAT AATGATAATG AAGAAATTCT GCTTCTTGCA
TCTTTAATTT AA
|
|---|
| Protein sequence | MQVLRLGSVG PDVKLAQSLL NKIGYPVGAV DGIYGTRTRQ AVIAFQRNNG LVADGIVGPA
TWSVFEQFLR GYAIYYVRPG DTLYNIAGRF YTSVNSIVTA NPGINPNVIN IGQRLVVPYG
IDVVFTDIDY TYEIMERDIQ GLKARYPFLE TGVAGTSVLG RNLYYLRLGT GPRQVFYNAA
HHAIEWITTV LLMKFAENFL KAYSTGSRIR GYNVREIWNQ SSIYIVPMVN PDGVDLVLNG
LSPTNPYYAD LLRWNTTGRP FSQVWSANIR GVDLNRNYPA SWEEAKAQEE ALGIFGPGPT
RYGGPYPLSE PESSAMVSFT RTHDFRLALA YHSQGRVIYW NYLNLAPPES LTIANAFARV
SGYIVLDVPY EAAYAGYKDW FIQEYRRPGF TIEVGLGQNP LPISQFNTIY NDNEEILLLA
SLI
|
|---|
| |